Parallel design and performance of nested filtering factorization preconditioner

Long Qu, L. Grigori, F. Nataf
{"title":"Parallel design and performance of nested filtering factorization preconditioner","authors":"Long Qu, L. Grigori, F. Nataf","doi":"10.1145/2503210.2503287","DOIUrl":null,"url":null,"abstract":"We present the parallel design and performance of the nested filtering factorization preconditioner (NFF), which can be used for solving linear systems arising from the discretization of a system of PDEs on unstructured grids. NFF has limited memory requirements, and it is based on a two level recursive decomposition that exploits a nested block arrow structure of the input matrix, obtained priorly by using graph partitioning techniques. It also allows to preserve several directions of interest of the input matrix to alleviate the effect of low frequency modes on the convergence of iterative methods. For a boundary value problem with highly heterogeneous coefficients, discretized on three-dimensional grids with 64 millions unknowns and 447 millions nonzero entries, we show experimentally that NFF scales up to 2048 cores of Genci's Bull system (Curie), and it is up to 2.6 times faster than the domain decomposition preconditioner Restricted Additive Schwarz implemented in PETSc.","PeriodicalId":371074,"journal":{"name":"2013 SC - International Conference for High Performance Computing, Networking, Storage and Analysis (SC)","volume":"14 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2013-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"8","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2013 SC - International Conference for High Performance Computing, Networking, Storage and Analysis (SC)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/2503210.2503287","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 8

Abstract

We present the parallel design and performance of the nested filtering factorization preconditioner (NFF), which can be used for solving linear systems arising from the discretization of a system of PDEs on unstructured grids. NFF has limited memory requirements, and it is based on a two level recursive decomposition that exploits a nested block arrow structure of the input matrix, obtained priorly by using graph partitioning techniques. It also allows to preserve several directions of interest of the input matrix to alleviate the effect of low frequency modes on the convergence of iterative methods. For a boundary value problem with highly heterogeneous coefficients, discretized on three-dimensional grids with 64 millions unknowns and 447 millions nonzero entries, we show experimentally that NFF scales up to 2048 cores of Genci's Bull system (Curie), and it is up to 2.6 times faster than the domain decomposition preconditioner Restricted Additive Schwarz implemented in PETSc.
嵌套滤波分解预调节器的并行设计与性能
本文提出了嵌套滤波分解预调节器(NFF)的并行设计和性能,该预调节器可用于求解非结构网格上由偏微分方程系统离散化引起的线性系统。NFF对内存的要求有限,它基于两级递归分解,该分解利用了输入矩阵的嵌套块箭头结构,该结构先前通过使用图划分技术获得。它还允许保留输入矩阵的几个感兴趣方向,以减轻低频模式对迭代方法收敛性的影响。对于具有高度非均匀系数的边值问题,在具有6400万个未知数和4.47亿个非零条目的三维网格上离散化,我们通过实验证明NFF可扩展到Genci的公牛系统(Curie)的2048个核,并且比PETSc中实现的域分解预处理条件Restricted Additive Schwarz快2.6倍。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信