Implementation of a biology data translation system on grid environments

Chao-Tung Yang, Yi-Chun Hsiung, H. Kan
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引用次数: 0

Abstract

Biological data exists all over the world as various Web services, which provide biologists with much useful information. However, heterogeneous data formats present a technical hurdle for biologists to fully take advantage of the information. It needs some power tools to handle this issue. The grid technology could help common biology tools with high performance and high throughput. Even so, the data formats produced from various biology tools are heterogeneous. The process of information integration of heterogeneous biological data is complex and difficult. This paper describes an approach to solve this problem by using XML technologies combine with BioGrid system. We use BioJava to integrate with our system for translating data into XML format. Finally, an example is used to illustrate how these techniques can come together in integrating heterogeneous biological data sources.
网格环境下生物数据转换系统的实现
生物数据以各种Web服务的形式存在于世界各地,为生物学家提供了许多有用的信息。然而,异构数据格式为生物学家充分利用这些信息带来了技术障碍。它需要一些电动工具来处理这个问题。网格技术可以帮助常见的生物工具实现高性能和高通量。即便如此,各种生物工具产生的数据格式也是异质的。异构生物数据的信息集成是一个复杂而困难的过程。本文介绍了一种将XML技术与生物网格系统相结合来解决这一问题的方法。我们使用BioJava与我们的系统集成,将数据转换为XML格式。最后,用一个例子来说明这些技术如何在集成异构生物数据源中结合在一起。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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