Efficient Counting of Network Motifs

Dror Marcus, Y. Shavitt
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引用次数: 32

Abstract

Counting network motifs has an important role in studying a wide range of complex networks. However, when the network size is large, as in the case of Internet Topology and WWW graphs counting the number of motifs becomes prohibitive. Devising efficient motif counting algorithms thus becomes an important goal. In this paper, we present efficient counting algorithms for 4-nodemotifs. We show how to efficiently count the total number of each type of motif, and the number of motifs adjacent to a node. We further present a new algorithm for node position-aware motif counting, namely partitioning the motif count by the node position in the motif. Since our algorithm is based on motifs, which are non-induced we also show how to calculate the count of induced motifs given the non-induced motif count. Finally, we report on initial implementation performance result using evaluation on a large-scale graph.
网络基元的有效计数
计算网络基序对于研究各种复杂网络具有重要作用。然而,当网络规模很大时,就像在Internet拓扑和WWW图的情况下,计算图案的数量变得令人望而却步。设计高效的基序计数算法因此成为一个重要的目标。本文提出了一种有效的4-nodemotifs计数算法。我们展示了如何有效地计算每种类型的motif的总数,以及与节点相邻的motif的数量。我们进一步提出了一种节点位置感知基序计数的新算法,即根据基序中节点的位置划分基序计数。由于我们的算法基于非诱导基序,我们还展示了如何在给定非诱导基序计数的情况下计算诱导基序的计数。最后,我们报告了在大规模图上使用评估的初步实现性能结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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