Automated classification of Bacterial Images extracted from Digital Microscope via Bag of Words Model

B. A. Mohamed, H. Afify
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引用次数: 15

Abstract

The performance recognition of bacteria cell images is an effective survey for treatment of various diseases caused by the bacteria. Many algorithms for bacteria classification are designed for the needs of analysis of large-scale microscopic image bacteria. However, the biologist interpretation is suffered from insufficient information and thus may lead to limited accuracy in the bacteria classification process. To handle this drawback, machine learning tools, and image analysis approaches tackled identification of different bacteria species for improving the clinical microbiology investigation. In the proposed study, 200 bacterial images for ten different bacteria species with 20 images for each specie are extracted from DIBaS (Digital Images of Bacteria Species dataset). This proposed framework is divided into image preprocessing phase which obtained by histogram equalization, feature extraction by Bag-of-words model and classification phase by Support Vector Machine (SVM). The main objective is to enhance the bacterial images and find the image feature descriptors from the enhanced images which allowing to classify the bacterial images. The experimental results provided an average accuracy of 97% with classifier speed for automated detection and classification of bacterial images which would greatly reduce the disease outbreaks in future researches.
基于词袋模型的数字显微镜细菌图像自动分类
细菌细胞图像的性能识别是对各种细菌引起的疾病进行治疗的有效调查。针对大规模显微图像细菌分析的需要,设计了许多细菌分类算法。然而,生物学家的解释受到信息不足的影响,因此可能导致细菌分类过程中的准确性有限。为了解决这一缺陷,机器学习工具和图像分析方法解决了不同细菌种类的鉴定,以改善临床微生物学调查。在本研究中,从DIBaS (Digital images of bacteria species dataset)中提取了10个不同细菌物种的200张细菌图像,每个物种20张图像。该框架分为直方图均衡化的图像预处理阶段、词袋模型的特征提取阶段和支持向量机(SVM)的分类阶段。主要目的是对细菌图像进行增强,并从增强后的图像中找到特征描述符,从而对细菌图像进行分类。实验结果为细菌图像的自动检测和分类提供了97%的平均准确率和分类器速度,这将大大减少未来研究中的疾病爆发。
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