An Agent-Based Model for Localized COVID-19 Transmission Dynamics and Intervention Impacts
J. Starr, Morgan P. Kain, S. Bhatia
{"title":"An Agent-Based Model for Localized COVID-19 Transmission Dynamics and Intervention Impacts","authors":"J. Starr, Morgan P. Kain, S. Bhatia","doi":"10.11159/icbb22.024","DOIUrl":null,"url":null,"abstract":"Throughout the COVID-19 pandemic, disease-modeling has guided government health officials in choosing appropriate interventions. However, most current models simulate disease spread on a more generalized scale, lacking specificity for localities such as towns or counties, leading to one-size-fits-all policies being instituted on the country or state-wide-level. However, localities differ in many social determinants of health, which impact disease dynamics therefore necessitating models tailored to individual locations. This research aims to answer this question: What local factors affect COVID-19 outbreak severity and intervention effectiveness? To do this, a novel agent-based disease model was created using NetLogo to simulate contextualized COVID-19 disease dynamics at the local level. Model inputs include population demographic composition, area size, vaccination ratio, interventions (mask, test-and-isolate, or lockdown), and compliance rate. Agents representing the simulated local population are assigned specified traits, and become \"susceptible”, \"exposed”, \"infected”, \"recovered”, \"quarantined”, or \"dead” as they interact with other agents. The model was validated using data from state and local health agencies for Westchester County, NY (84.2% accuracy). A sensitivity analysis demonstrated that a higher elderly population, a lower young population, a lower vaccination rate, and weaker interventions were all factors that increased outbreak severity. A comparison of selective localities representing metric axes of high/low age and high/low vaccination was conducted for four different U.S. counties and showed that 1) any intervention would dramatically reduce locality variations and 2) interventions have higher impact in higher risk localities. This model enables local officials to better focus limited resources when making health related decisions, and a website (www.localcovidmodel.org) has been created for model access. © 2022, Avestia Publishing. All rights reserved.","PeriodicalId":394576,"journal":{"name":"Proceedings of the 8th World Congress on New Technologies","volume":"28 3","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 8th World Congress on New Technologies","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.11159/icbb22.024","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Throughout the COVID-19 pandemic, disease-modeling has guided government health officials in choosing appropriate interventions. However, most current models simulate disease spread on a more generalized scale, lacking specificity for localities such as towns or counties, leading to one-size-fits-all policies being instituted on the country or state-wide-level. However, localities differ in many social determinants of health, which impact disease dynamics therefore necessitating models tailored to individual locations. This research aims to answer this question: What local factors affect COVID-19 outbreak severity and intervention effectiveness? To do this, a novel agent-based disease model was created using NetLogo to simulate contextualized COVID-19 disease dynamics at the local level. Model inputs include population demographic composition, area size, vaccination ratio, interventions (mask, test-and-isolate, or lockdown), and compliance rate. Agents representing the simulated local population are assigned specified traits, and become "susceptible”, "exposed”, "infected”, "recovered”, "quarantined”, or "dead” as they interact with other agents. The model was validated using data from state and local health agencies for Westchester County, NY (84.2% accuracy). A sensitivity analysis demonstrated that a higher elderly population, a lower young population, a lower vaccination rate, and weaker interventions were all factors that increased outbreak severity. A comparison of selective localities representing metric axes of high/low age and high/low vaccination was conducted for four different U.S. counties and showed that 1) any intervention would dramatically reduce locality variations and 2) interventions have higher impact in higher risk localities. This model enables local officials to better focus limited resources when making health related decisions, and a website (www.localcovidmodel.org) has been created for model access. © 2022, Avestia Publishing. All rights reserved.
基于agent的局部COVID-19传播动态及干预影响模型
在2019冠状病毒病大流行期间,疾病建模指导政府卫生官员选择适当的干预措施。然而,目前大多数模型在更广泛的范围内模拟疾病传播,缺乏对城镇或县等地方的特异性,导致在国家或州范围内制定一刀切的政策。然而,各地在许多影响疾病动态的健康社会决定因素方面存在差异,因此需要针对个别地点量身定制的模型。本研究旨在回答以下问题:哪些局部因素影响COVID-19疫情严重程度和干预效果?为此,使用NetLogo创建了一种新的基于主体的疾病模型,以模拟地方层面的情境化COVID-19疾病动态。模型输入包括人口统计组成、面积大小、疫苗接种率、干预措施(口罩、检测隔离或封锁)和依从率。代表模拟的当地人口的代理被赋予特定的特征,并在与其他代理相互作用时变得“易感”、“暴露”、“感染”、“恢复”、“隔离”或“死亡”。该模型使用纽约州威彻斯特县州和地方卫生机构的数据进行了验证(准确率为84.2%)。敏感性分析表明,老年人口较多、年轻人口较少、疫苗接种率较低和干预措施较弱都是增加疫情严重程度的因素。对代表高/低年龄和高/低疫苗接种度量轴的选择性地区进行了比较,结果表明:1)任何干预措施都可以显著减少地区差异;2)干预措施在高风险地区具有更高的影响。这一模式使地方官员在作出与卫生有关的决定时能够更好地集中有限的资源,并建立了一个网站(www.localcovidmodel.org)供模式访问。©2022,Avestia Publishing。版权所有。
本文章由计算机程序翻译,如有差异,请以英文原文为准。