Systematic approach to identify therapeutic targets and functional pathways for the cervical cancer.

IF 3.6 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Md Tanvir Hasan, Md Rakibul Islam, Md Rezwan Islam, Baraa Riyadh Altahan, Kawsar Ahmed, Francis M Bui, Sami Azam, Mohammad Ali Moni
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Abstract

Background: In today's society, cancer has become a big concern. The most common cancers in women are breast cancer (BC), endometrial cancer (EC), ovarian cancer (OC), and cervical cancer (CC). CC is a type of cervix cancer that is the fourth most common cancer in women and the fourth major cause of death.

Results: This research uses a network approach to discover genetic connections, functional enrichment, pathways analysis, microRNAs transcription factors (miRNA-TF) co-regulatory network, gene-disease associations, and therapeutic targets for CC. Three datasets from the NCBI's GEO collection were considered for this investigation. Then, using a comparison approach between the datasets, 315 common DEGs were discovered. The PPI network was built using a variety of combinatorial statistical approaches and bioinformatics tools, and the PPI network was then utilized to identify hub genes and critical modules.

Conclusion: Furthermore, we discovered that CC has specific similar links with the progression of different tumors using Gene Ontology terminology and pathway analysis. Transcription factors-gene linkages, gene-disease correlations, and the miRNA-TF co-regulatory network were revealed to have functional enrichments. We believe the candidate drugs identified in this study could be effective for advanced CC treatment.

Abstract Image

Abstract Image

Abstract Image

确定宫颈癌治疗靶点和功能通路的系统方法。
背景:在当今社会,癌症已经成为一个大问题。女性中最常见的癌症是乳腺癌(BC)、子宫内膜癌(EC)、卵巢癌(OC)和宫颈癌(CC)。CC是宫颈癌的一种,是妇女中第四大常见癌症,也是第四大死亡原因。结果:本研究使用网络方法发现CC的遗传联系、功能富集、途径分析、microRNAs转录因子(miRNA-TF)共调控网络、基因疾病关联和治疗靶点。本研究考虑了NCBI GEO收集的三个数据集。然后,使用数据集之间的比较方法,发现315个共同的deg。利用多种组合统计方法和生物信息学工具构建PPI网络,然后利用PPI网络识别中心基因和关键模块。结论:此外,我们使用基因本体术语和通路分析发现CC与不同肿瘤的进展具有特定的相似联系。转录因子-基因联系、基因-疾病相关性和miRNA-TF共调控网络被发现具有功能丰富。我们相信本研究确定的候选药物可能对晚期CC治疗有效。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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