Global polymorphism of Plasmodium falciparum histidine rich proteins 2/3 and impact on malaria rapid diagnostic test detection: a systematic review and meta-analysis.

IF 3.9 3区 医学 Q1 PATHOLOGY
Loick P Kojom Foko, Jahnvi Jakhan, Geetika Narang, Vineeta Singh
{"title":"Global polymorphism of <i>Plasmodium falciparum</i> histidine rich proteins 2/3 and impact on malaria rapid diagnostic test detection: a systematic review and meta-analysis.","authors":"Loick P Kojom Foko,&nbsp;Jahnvi Jakhan,&nbsp;Geetika Narang,&nbsp;Vineeta Singh","doi":"10.1080/14737159.2023.2255136","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>This review presents an overview of field findings on sequence variation of <i>Plasmodium falciparum</i> histidine-rich proteins 2/3 (<i>Pf</i>HRP2/3) for which reference types (1-24) have been identified, and its critical impact on <i>Pf</i>HRP2-based rapid diagnostic test (RDT) detection.</p><p><strong>Research design and methods: </strong>This systematic review and meta-analysis was registered with PROSPERO, CRD42022316027, and conducted as per the PRISMA guidelines, and the methodological quality of studies was assessed.</p><p><strong>Results: </strong>Of the 2184 records identified, 34 studies were included mostly from Africa (47.1%) and Asia (35.3%). The reference <i>Pf</i>HRP2 types 1, 2, 3, 6, and 7 are invariably found at proportions ≥ 80-100% in all areas with the exception of The Americas where their proportion is very low. The proteins exhibited high diversity of variants/unknown types, especially for types 1, 2, 4, and 7. Eleven major <i>Pf</i>HRP2 epitopes were found at pooled proportion > 90%. The existing models to predict RDT detection are greatly limited by the impact of factors such as low (very low) parasitemia, RDT brand, and <i>Pf</i>HRP3 cross-reactivity. <i>Pf</i>HRP2 length and presence/number of a given reference repeat type/variant did not seem to impact RDT detection.</p><p><strong>Conclusions: </strong><i>Pf</i>HRP2/3 are highly polymorphic and current findings are insufficient, conflicting and not convincing enough to conclude on the role of <i>Pf</i>HRP2/3 sequence polymorphism in <i>Pf</i>HRP2-based RDT detection.</p>","PeriodicalId":12113,"journal":{"name":"Expert Review of Molecular Diagnostics","volume":null,"pages":null},"PeriodicalIF":3.9000,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Expert Review of Molecular Diagnostics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/14737159.2023.2255136","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/9/12 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"PATHOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Background: This review presents an overview of field findings on sequence variation of Plasmodium falciparum histidine-rich proteins 2/3 (PfHRP2/3) for which reference types (1-24) have been identified, and its critical impact on PfHRP2-based rapid diagnostic test (RDT) detection.

Research design and methods: This systematic review and meta-analysis was registered with PROSPERO, CRD42022316027, and conducted as per the PRISMA guidelines, and the methodological quality of studies was assessed.

Results: Of the 2184 records identified, 34 studies were included mostly from Africa (47.1%) and Asia (35.3%). The reference PfHRP2 types 1, 2, 3, 6, and 7 are invariably found at proportions ≥ 80-100% in all areas with the exception of The Americas where their proportion is very low. The proteins exhibited high diversity of variants/unknown types, especially for types 1, 2, 4, and 7. Eleven major PfHRP2 epitopes were found at pooled proportion > 90%. The existing models to predict RDT detection are greatly limited by the impact of factors such as low (very low) parasitemia, RDT brand, and PfHRP3 cross-reactivity. PfHRP2 length and presence/number of a given reference repeat type/variant did not seem to impact RDT detection.

Conclusions: PfHRP2/3 are highly polymorphic and current findings are insufficient, conflicting and not convincing enough to conclude on the role of PfHRP2/3 sequence polymorphism in PfHRP2-based RDT detection.

恶性疟原虫富含组氨酸蛋白2/3的全球多态性及其对疟疾快速诊断测试检测的影响:一项系统综述和荟萃分析。
背景:这篇综述概述了恶性疟原虫富含组氨酸蛋白2/3(PfHRP2/3)的序列变异的现场发现,其参考类型(1-24)已被确定,以及其对基于PfHRP2的快速诊断试验(RDT)检测的关键影响。研究设计和方法:这项系统综述和荟萃分析在PROSPERO注册,CRD42022316027,并根据PRISMA指南进行,并评估了研究的方法学质量。结果:在确定的2184个记录中,34项研究主要来自非洲(47.1%)和亚洲(35.3%)。参考PfHRP2类型1、2、3、6和7总是按比例存在 ≥ 在所有地区都达到80-100%,但美洲除外,那里的比例非常低。蛋白质表现出高度多样性的变体/未知类型,特别是对于类型1、2、4和7。以合并比例发现了11个主要的PfHRP2表位 > 90%。现有的预测RDT检测的模型在很大程度上受到低(非常低)寄生虫血症、RDT品牌和PfHRP3交叉反应性等因素的影响。PfHRP2长度和给定参考重复序列类型/变体的存在/数量似乎不影响RDT检测。结论:PfHRP2/3具有高度多态性,目前的研究结果不充分、不一致,也不足以令人信服地得出PfHRP2/3序列多态性在基于PfHRP2的RDT检测中的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
6.60
自引率
0.00%
发文量
71
审稿时长
1 months
期刊介绍: Expert Review of Molecular Diagnostics (ISSN 1473-7159) publishes expert reviews of the latest advancements in the field of molecular diagnostics including the detection and monitoring of the molecular causes of disease that are being translated into groundbreaking diagnostic and prognostic technologies to be used in the clinical diagnostic setting. Each issue of Expert Review of Molecular Diagnostics contains leading reviews on current and emerging topics relating to molecular diagnostics, subject to a rigorous peer review process; editorials discussing contentious issues in the field; diagnostic profiles featuring independent, expert evaluations of diagnostic tests; meeting reports of recent molecular diagnostics conferences and key paper evaluations featuring assessments of significant, recently published articles from specialists in molecular diagnostic therapy. Expert Review of Molecular Diagnostics provides the forum for reporting the critical advances being made in this ever-expanding field, as well as the major challenges ahead in their clinical implementation. The journal delivers this information in concise, at-a-glance article formats: invaluable to a time-constrained community.
文献相关原料
公司名称 产品信息 采购帮参考价格
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信