Proteomics advances towards developing SARS-CoV-2 therapeutics using in silico drug repurposing approaches

Q1 Pharmacology, Toxicology and Pharmaceutics
Amrita Mukherjee , Ayushi Verma , Surbhi Bihani, Ananya Burli, Krishi Mantri, Sanjeeva Srivastava
{"title":"Proteomics advances towards developing SARS-CoV-2 therapeutics using in silico drug repurposing approaches","authors":"Amrita Mukherjee ,&nbsp;Ayushi Verma ,&nbsp;Surbhi Bihani,&nbsp;Ananya Burli,&nbsp;Krishi Mantri,&nbsp;Sanjeeva Srivastava","doi":"10.1016/j.ddtec.2021.06.004","DOIUrl":null,"url":null,"abstract":"<div><p>Standing amidst the COVID-19 pandemic, we have faced major medical and economic crisis in recent times which remains to be an unresolved issue till date. Although the scientific community has made significant progress towards diagnosis and understanding the disease; however, effective therapeutics are still lacking. Several omics-based studies, especially proteomics and interactomics, have contributed significantly in terms of identifying biomarker panels that can potentially be used for the disease prognosis. This has also paved the way to identify the targets for drug repurposing as a therapeutic alternative. US Food and Drug Administration (FDA) has set in motion more than 500 drug development programs on an emergency basis, most of them are focusing on repurposed drugs. Remdesivir is one such success of a robust and quick drug repurposing approach. The advancements in omics-based technologies has allowed to explore altered host proteins, which were earlier restricted to only SARS-CoV-2 protein signatures. In this article, we have reviewed major contributions of proteomics and interactomics techniques towards identifying therapeutic targets for COVID-19. Furthermore, <em>in-silico</em> molecular docking approaches to streamline potential drug candidates are also discussed.</p></div>","PeriodicalId":36012,"journal":{"name":"Drug Discovery Today: Technologies","volume":"39 ","pages":"Pages 1-12"},"PeriodicalIF":0.0000,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ddtec.2021.06.004","citationCount":"4","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Drug Discovery Today: Technologies","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1740674921000123","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Pharmacology, Toxicology and Pharmaceutics","Score":null,"Total":0}
引用次数: 4

Abstract

Standing amidst the COVID-19 pandemic, we have faced major medical and economic crisis in recent times which remains to be an unresolved issue till date. Although the scientific community has made significant progress towards diagnosis and understanding the disease; however, effective therapeutics are still lacking. Several omics-based studies, especially proteomics and interactomics, have contributed significantly in terms of identifying biomarker panels that can potentially be used for the disease prognosis. This has also paved the way to identify the targets for drug repurposing as a therapeutic alternative. US Food and Drug Administration (FDA) has set in motion more than 500 drug development programs on an emergency basis, most of them are focusing on repurposed drugs. Remdesivir is one such success of a robust and quick drug repurposing approach. The advancements in omics-based technologies has allowed to explore altered host proteins, which were earlier restricted to only SARS-CoV-2 protein signatures. In this article, we have reviewed major contributions of proteomics and interactomics techniques towards identifying therapeutic targets for COVID-19. Furthermore, in-silico molecular docking approaches to streamline potential drug candidates are also discussed.

Abstract Image

Abstract Image

利用计算机药物再利用方法开发SARS-CoV-2治疗方法的蛋白质组学进展
当前,在新冠肺炎疫情背景下,我们面临重大医疗和经济危机,这一问题至今仍未得到解决。尽管科学界在诊断和了解该病方面取得了重大进展;然而,有效的治疗方法仍然缺乏。一些基于组学的研究,特别是蛋白质组学和相互作用组学,在确定可用于疾病预后的生物标志物面板方面做出了重大贡献。这也为确定药物重新利用作为治疗替代方案的目标铺平了道路。美国食品和药物管理局(FDA)紧急启动了500多个药物开发项目,其中大多数都集中在重新利用药物上。Remdesivir就是这样一种强大而快速的药物再利用方法的成功案例。基于组学的技术的进步使得探索改变的宿主蛋白质成为可能,而这些蛋白质以前仅限于SARS-CoV-2的蛋白质特征。在本文中,我们回顾了蛋白质组学和相互作用组学技术在确定COVID-19治疗靶点方面的主要贡献。此外,还讨论了简化潜在候选药物的硅分子对接方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Drug Discovery Today: Technologies
Drug Discovery Today: Technologies Pharmacology, Toxicology and Pharmaceutics-Drug Discovery
自引率
0.00%
发文量
0
期刊介绍: Discovery Today: Technologies compares different technological tools and techniques used from the discovery of new drug targets through to the launch of new medicines.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信