{"title":"A bacterial glycolipid essential for membrane protein integration.","authors":"Kohki Fujikawa, Shoko Mori, Ken-Ichi Nishiyama, Keiko Shimamoto","doi":"10.1016/bs.accb.2022.09.005","DOIUrl":null,"url":null,"abstract":"<p><p>The proper conformation and orientation of membrane protein integration in cells is an important biological event. Interestingly, a new factor named MPIase (membrane protein integrase) was proven essential in this process in Escherichia coli, besides proteinaceous factors, such as Sec translocons and an insertase YidC. A combination of spectroscopic analyses and synthetic work has revealed that MPIase is a glycolipid despite its enzyme-like activity. MPIase has a long glycan chain comprised of repeating trisaccharide units, a pyrophosphate linker, and a diacylglycerol anchor. In order to determine the mechanism of its activity, we synthesized a trisaccharyl pyrophospholipid termed mini-MPIase-3, a minimal unit of MPIase, and its derivatives. A significant activity of mini-MPIase-3 indicated that it involves an essential structure for membrane protein integration. We also analyzed intermolecular interactions of MPIase or its synthetic analogs with a model substrate protein using physicochemical methods. The structure-activity relationship studies demonstrated that the glycan part of MPIase prevents the aggregation of substrate proteins, and the 6-O-acetyl group on glucosamine and the phosphate of MPIase play important roles for interactions with substrate proteins. MPIase serves at an initial step in the Sec-independent integration, whereas YidC, proton motive force, and/or SecYEG cooperatively function(s) with MPIase at the following step in vivo. Furthermore, depletion of the biosynthetic enzyme demonstrated that MPIase is crucial for membrane protein integration and cell growth. Thus, we elucidated new biological functions of glycolipids using a combination of synthetic chemistry, biochemistry, physicochemical measurements, and molecular-biological approaches.</p>","PeriodicalId":7215,"journal":{"name":"Advances in carbohydrate chemistry and biochemistry","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advances in carbohydrate chemistry and biochemistry","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1016/bs.accb.2022.09.005","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Chemistry","Score":null,"Total":0}
引用次数: 0
Abstract
The proper conformation and orientation of membrane protein integration in cells is an important biological event. Interestingly, a new factor named MPIase (membrane protein integrase) was proven essential in this process in Escherichia coli, besides proteinaceous factors, such as Sec translocons and an insertase YidC. A combination of spectroscopic analyses and synthetic work has revealed that MPIase is a glycolipid despite its enzyme-like activity. MPIase has a long glycan chain comprised of repeating trisaccharide units, a pyrophosphate linker, and a diacylglycerol anchor. In order to determine the mechanism of its activity, we synthesized a trisaccharyl pyrophospholipid termed mini-MPIase-3, a minimal unit of MPIase, and its derivatives. A significant activity of mini-MPIase-3 indicated that it involves an essential structure for membrane protein integration. We also analyzed intermolecular interactions of MPIase or its synthetic analogs with a model substrate protein using physicochemical methods. The structure-activity relationship studies demonstrated that the glycan part of MPIase prevents the aggregation of substrate proteins, and the 6-O-acetyl group on glucosamine and the phosphate of MPIase play important roles for interactions with substrate proteins. MPIase serves at an initial step in the Sec-independent integration, whereas YidC, proton motive force, and/or SecYEG cooperatively function(s) with MPIase at the following step in vivo. Furthermore, depletion of the biosynthetic enzyme demonstrated that MPIase is crucial for membrane protein integration and cell growth. Thus, we elucidated new biological functions of glycolipids using a combination of synthetic chemistry, biochemistry, physicochemical measurements, and molecular-biological approaches.
膜蛋白在细胞内整合的正确构象和取向是一项重要的生物学事件。有趣的是,除了Sec translocon和插入酶YidC等蛋白因子外,一种名为MPIase(膜蛋白整合酶)的新因子被证明在大肠杆菌的这一过程中必不可少。光谱分析和合成工作的结合表明,尽管MPIase具有酶样活性,但它是一种糖脂。MPIase具有由重复的三糖单元、焦磷酸连接体和二酰基甘油锚定组成的长聚糖链。为了确定其活性的机制,我们合成了一种名为mini-MPIase-3的三糖焦磷脂,它是MPIase的最小单位,以及它的衍生物。mini-MPIase-3的显著活性表明它参与了膜蛋白整合的必要结构。我们还使用物理化学方法分析了mpase或其合成类似物与模型底物蛋白的分子间相互作用。构效关系研究表明,MPIase的聚糖部分阻止了底物蛋白的聚集,葡萄糖胺和磷酸基上的6- o -乙酰基在与底物蛋白的相互作用中起重要作用。MPIase在独立于sec的整合过程中起初始作用,而YidC、质子动力和/或SecYEG在体内的后续步骤中与MPIase协同作用。此外,耗尽的生物合成酶表明,MPIase对膜蛋白整合和细胞生长至关重要。因此,我们利用合成化学、生物化学、物理化学测量和分子生物学方法的结合来阐明糖脂的新的生物学功能。
期刊介绍:
Advances in Carbohydrate Chemistry and Biochemistry has provided, since its inception in 1945, critical and informative articles written by research specialists that integrate the industrial, analytical, and technological aspects of biochemistry, organic chemistry, and instrumentation methodology to the study of carbohydrates. Its articles present a definitive interpretation of the current status and future trends in carbohydrate chemistry and biochemistry.