25(OH)Vitamin D and autism spectrum disorder: genetic overlap and causality.

GuoSheng Yu, MinZhi Xu, Yao Chen, HaiYan Ke
{"title":"25(OH)Vitamin D and autism spectrum disorder: genetic overlap and causality.","authors":"GuoSheng Yu,&nbsp;MinZhi Xu,&nbsp;Yao Chen,&nbsp;HaiYan Ke","doi":"10.1186/s12263-023-00727-0","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>To identify whether there exists a genetic correlation and causal relationship between 25(OH)D and autism spectrum disorder (ASD).</p><p><strong>Methods: </strong>Based on large-scale genome-wide association studies, a series of genetic approaches were adopted to obtain summary statistics. Using linkage disequilibrium score regression, we assessed the shared polygenic structure between traits and performed pleiotropic analysis under composite null hypothesis (PLACO) to identify pleiotropic loci between complex traits. A bidirectional Mendelian randomization (MR) analysis was applied to investigate whether there is a causal relationship between 25(OH)D and ASD.</p><p><strong>Results: </strong>The linkage disequilibrium score regression (LDSC) showed a negative genetic correlation between 25(OH)D and ASD (r<sub>g</sub> = - 0.227, P < 0.05), and PLACO analysis identified 20 independent pleiotropic loci matched to 24 pleiotropic genes, of which the function reveals an underlying mechanism on 25(OH)D and ASD. In Mendelian randomization analysis, the inverse variance-weighted (IVW) method with OR = 0.941 (0.796, 1.112) and p < 0.474 did not show a causal relationship between 25(OH)D and ASD, while, in the reverse Mendelian randomization analysis, IVW method showed OR = 1.042 (0.930, 1.169), indicating no causal relationship either.</p><p><strong>Conclusion: </strong>This study provides evidence for a shared genetic overlap between 25(OH)D and ASD. Bidirectional MR analysis also did not show a definite causal relationship between 25(OH)D and ASD.</p>","PeriodicalId":12554,"journal":{"name":"Genes & Nutrition","volume":"18 1","pages":"8"},"PeriodicalIF":0.0000,"publicationDate":"2023-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10134540/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genes & Nutrition","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/s12263-023-00727-0","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Objective: To identify whether there exists a genetic correlation and causal relationship between 25(OH)D and autism spectrum disorder (ASD).

Methods: Based on large-scale genome-wide association studies, a series of genetic approaches were adopted to obtain summary statistics. Using linkage disequilibrium score regression, we assessed the shared polygenic structure between traits and performed pleiotropic analysis under composite null hypothesis (PLACO) to identify pleiotropic loci between complex traits. A bidirectional Mendelian randomization (MR) analysis was applied to investigate whether there is a causal relationship between 25(OH)D and ASD.

Results: The linkage disequilibrium score regression (LDSC) showed a negative genetic correlation between 25(OH)D and ASD (rg = - 0.227, P < 0.05), and PLACO analysis identified 20 independent pleiotropic loci matched to 24 pleiotropic genes, of which the function reveals an underlying mechanism on 25(OH)D and ASD. In Mendelian randomization analysis, the inverse variance-weighted (IVW) method with OR = 0.941 (0.796, 1.112) and p < 0.474 did not show a causal relationship between 25(OH)D and ASD, while, in the reverse Mendelian randomization analysis, IVW method showed OR = 1.042 (0.930, 1.169), indicating no causal relationship either.

Conclusion: This study provides evidence for a shared genetic overlap between 25(OH)D and ASD. Bidirectional MR analysis also did not show a definite causal relationship between 25(OH)D and ASD.

Abstract Image

Abstract Image

Abstract Image

维生素D与自闭症谱系障碍:基因重叠和因果关系。
目的:探讨25(OH)D与自闭症谱系障碍(ASD)之间是否存在遗传相关和因果关系。方法:在大规模全基因组关联研究的基础上,采用一系列遗传学方法进行汇总统计。利用连锁不平衡评分回归分析了性状间共有的多基因结构,并在复合零假设(PLACO)下进行了多效性分析,以确定复杂性状间的多效位点。采用双向孟德尔随机化(MR)分析探讨25(OH)D与ASD之间是否存在因果关系。结果:连锁不平衡评分回归(LDSC)显示25(OH)D与ASD呈负遗传相关(rg = - 0.227, P < 0.05), PLACO分析鉴定出20个独立的多效位点与24个多效基因相匹配,其功能揭示了25(OH)D与ASD的潜在机制。在孟德尔随机化分析中,逆方差加权(IVW)方法的OR = 0.941(0.796, 1.112)和p。结论:本研究为25(OH)D与ASD之间存在遗传重叠提供了证据。双向MR分析也未显示25(OH)D与ASD之间存在明确的因果关系。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信