Toward representative genomic research: the children's rare disease cohorts experience.

Therapeutic advances in rare disease Pub Date : 2023-08-22 eCollection Date: 2023-01-01 DOI:10.1177/26330040231181406
Zoë J Frazier, Eurnestine Brown, Shira Rockowitz, Ted Lee, Bo Zhang, Abigail Sveden, Nancy L Chamberlin, Kira A Dies, Annapurna Poduri, Piotr Sliz, Maya Chopra
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Abstract

Background: Due to racial, cultural, and linguistic marginalization, some populations experience disproportionate barriers to genetic testing in both clinical and research settings. It is difficult to track such disparities due to non-inclusive self-reported race and ethnicity categories within the electronic health record (EHR). Inclusion and access for all populations is critical to achieve health equity and to capture the full spectrum of rare genetic disease.

Objective: We aimed to create revised race and ethnicity categories. Additionally, we identified racial and ethnic under-representation amongst three cohorts: (1) the general Boston Children's Hospital patient population (general BCH), (2) the BCH patient population that underwent clinical genomic testing (clinical sequencing), and (3) Children's Rare Disease Cohort (CRDC) research initiative participants.

Design and methods: Race and ethnicity data were collected from the EHRs of the general BCH, clinical sequencing, and CRDC cohorts. We constructed a single comprehensive set of race and ethnicity categories. EHR-based race and ethnicity variables were mapped within each cohort to the revised categories. Then, the numbers of patients within each revised race and ethnicity category were compared across cohorts.

Results: There was a significantly lower percentage of Black or African American/African, non-Hispanic/non-Latine individuals in the CRDC cohort compared with the general BCH cohort, but there was no statistically significant difference between the CRDC and the clinical sequencing cohorts. There was a significantly lower percentage of multi-racial, Hispanic/Latine individuals in the CRDC cohort than the clinical sequencing cohort. White, non-Hispanic/non-Latine individuals were over-represented in the CRDC compared to the two other groups.

Conclusion: We highlight underrepresentation of certain racial and ethnic populations in sequencing cohorts compared to the general hospital population. We propose a range of measures to address these disparities, to strive for equitable future precision medicine-based clinical care and for the benefit of the whole rare disease community.

Abstract Image

Abstract Image

开展有代表性的基因组研究:儿童罕见病队列的经验。
背景:由于种族、文化和语言上的边缘化,一些人群在临床和研究环境中接受基因检测时会遇到过多障碍。由于电子健康记录(EHR)中自我报告的种族和民族类别不具有包容性,因此很难跟踪这些差异。要实现健康公平并全面掌握罕见遗传病的情况,所有人群的包容性和可及性至关重要:我们的目标是创建经修订的种族和民族类别。此外,我们还在三个群体中发现了种族和民族代表性不足的情况:(1) 波士顿儿童医院的普通患者群体(普通BCH),(2) 接受临床基因组测试(临床测序)的BCH患者群体,(3) 儿童罕见病队列(CRDC)研究计划参与者:我们从 BCH、临床测序和 CRDC 队列的电子病历中收集了种族和民族数据。我们构建了一套全面的种族和民族类别。将每个队列中基于电子病历的种族和民族变量映射到修订后的类别中。然后,比较不同队列中每个修订种族和人种类别的患者人数:结果:与普通 BCH 队列相比,CRDC 队列中黑人或非裔美国人/非洲人、非西班牙裔/非拉丁裔的比例明显较低,但 CRDC 队列与临床测序队列之间没有统计学意义上的显著差异。在 CRDC 队列中,多种族、西班牙裔/拉丁裔个体的比例明显低于临床测序队列。与其他两组相比,非西班牙裔/非拉丁裔白人在CRDC中的比例过高:我们强调,与普通医院人群相比,某些种族和民族人群在测序队列中的代表性不足。我们提出了一系列措施来解决这些差异,努力实现未来以精准医学为基础的临床护理的公平性,并造福于整个罕见病群体。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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