Bayesian estimates of genetic effects on calf survival in Hardhenu (Bos taurus × Bos indicus) cattle

IF 1.9 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE
Devesh Kumar Yadav, Zile S. Malik, Spandan Shashwat Dash,  Pushpa, Yogesh C. Bangar, Ankit Magotra
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Abstract

The aim of the present study is to carry out a risk analysis and Bayesian estimates of genetic effects on calf survival in Hardhenu cattle using data records of 2593 calves born to 102 sires and 790 dams over 25 years. The Bayesian analysis using Gibbs sampling was employed towards threshold animal models to estimate direct and maternal effects on animal survival of studied population. The results showed that mortality from birth to 3 months of age (S1), birth to 6 months of age (S2) and birth to 12 months of age (S3) was 10.22, 12.88 and 14.65%, respectively. It was revealed from the results of logistic regression analysis that the male animals had greater risk (1.41–1.61 times) of mortality during S1, S2 and S3 as compared to female animals. However, calves born during rainy season had higher risk (1.36 to 1.44 times) of mortality than calves born during winter season. Among died animals, the simultaneous infection of respiratory and digestive diseases had leading contribution (26.84%–30.19%) to deaths while alone of them contributed to 18%–20% only. On evaluation of six threshold animal models, model 1 was found to be most appropriate model and the Bayesian estimates (95% highest posterior density confidence intervals) of direct additive heritability for S1, S2 and S3 under model 1 were 0.15 ± 0.07 (0.04–0.23), 0.23 ± 0.12, (0.02–0.44) and 0.26 ± 0.06 (0.08–0.41), respectively. It was concluded that the inclusion of survival traits in existing selection criteria may be helpful to increase calf survival and ultimately economic gain in the dairy herd.

遗传效应对哈德亨努牛(Bos taurus × Bos indicus)小牛存活率的贝叶斯估计。
本研究的目的是利用25年来102头牛和790头牛所生的2593头小牛的数据记录,对哈德亨努牛的遗传影响进行风险分析和贝叶斯估计。采用Gibbs抽样的贝叶斯分析方法建立阈值动物模型,以估计直接和母系对研究种群动物存活率的影响。结果表明:出生至3月龄(S1)、出生至6月龄(S2)和出生至12月龄(S3)的死亡率分别为10.22%、12.88%和14.65%。logistic回归分析结果显示,雄性动物在S1、S2和S3期的死亡风险为雌性动物的1.41 ~ 1.61倍。然而,在雨季出生的小牛比在冬季出生的小牛死亡率更高(1.36至1.44倍)。在死亡动物中,呼吸道和消化系统疾病同时感染是导致死亡的主要原因(26.84% ~ 30.19%),而单独感染仅占18% ~ 20%。通过对6种阈值动物模型的评估,发现模型1是最合适的模型,模型1下S1、S2和S3的直接加性遗传力Bayesian估计值(95%最高后验密度置信区间)分别为0.15±0.07(0.04-0.23)、0.23±0.12、(0.02-0.44)和0.26±0.06(0.08-0.41)。综上所述,在现有的选择标准中纳入生存性状可能有助于提高小牛成活率,最终提高奶牛群的经济效益。
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来源期刊
Journal of Animal Breeding and Genetics
Journal of Animal Breeding and Genetics 农林科学-奶制品与动物科学
CiteScore
5.20
自引率
3.80%
发文量
58
审稿时长
12-24 weeks
期刊介绍: The Journal of Animal Breeding and Genetics publishes original articles by international scientists on genomic selection, and any other topic related to breeding programmes, selection, quantitative genetic, genomics, diversity and evolution of domestic animals. Researchers, teachers, and the animal breeding industry will find the reports of interest. Book reviews appear in many issues.
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