[类风湿关节炎患者滑膜组织长链非编码RNA人白细胞抗原复合物P5(lncRNA HCP5)表达上调,与免疫细胞浸润相关]。

Jianwei Xiao, Xu Cai, Xinmin Huang, Fenlian Guo, Xinpeng Chen, Yiwei Hong, Zhihua Yin, Zhizhong Ye
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引用次数: 0

摘要

目的鉴定类风湿关节炎(RA)滑膜中表达的潜在长链非编码RNA (lncRNA),并探讨其与免疫细胞浸润的关系。方法从GEO数据库中下载RA滑膜资料并进行归一化处理。使用多种机器学习方法确定了RA发病的关键lncrna。通过估计RNA转录物相对亚群(CIBER-SORT)的细胞类型鉴定,测定了RA滑膜中22个免疫细胞群的浸润情况。分析了关键lncRNA与浸润性免疫细胞的关系。最后,应用实时定量PCR验证关键lncRNA在RA滑膜细胞中的表达。结果lncRNA人白细胞抗原复合物P5(human leukocyte antigen complex P5, HCP5)是与RA发病相关的关键lncRNA。浸润分析显示RA滑膜组织中CD8+ T细胞、γδ T细胞和M1巨噬细胞丰度增加,M2巨噬细胞丰度降低。相关分析表明,lncRNA HCP5表达与RA滑膜组织中CD8+ T细胞、γδ T细胞、M1巨噬细胞浸润丰度呈正相关。此外,lncRNA HCP5在RA滑膜细胞中的表达上调。结论lncRNA HCP5在RA滑膜组织中表达上调,可能与免疫细胞浸润有关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[The expression of long non-coding RNA human leukocyte antigen complex P5(lncRNA HCP5) in synovial tissue of patients with rheumatoid arthritis is up-regulated and correlated with immune cell infiltration].

Objective To identify the potential long non-coding RNA (lncRNA) expressed in rheumatoid arthritis (RA) synovium key to RA onset and investigate its association with immune cell infiltration. Methods RA synovium data were downloaded from the GEO database and normalized. The lncRNAs key to RA onset were identified using multiple machine learning methods. Infiltration of 22 immune cell populations in RA synovium was measured by cell-type identification by estimating relative subsets of RNA transcripts (CIBER-SORT). The relationship between the key lncRNA and infiltrating immune cells was analyzed. Finally, real-time quantitative PCR was applied to validate the expression of the key lncRNA in RA synovial cells. Results lncRNA human leukocyte antigen complex P5(HCP5) was identified as the key lncRNA associated with RA onset. Infiltration analysis revealed increased abundance of CD8+ T cells, γδ T cells, and M1 macrophages while decreased abundance of M2 macrophages in RA synovial tissue. Correlation analysis demonstrated that the lncRNA HCP5 expression was positively associated with the infiltration abundance of CD8+ T cells, γδ T cells, and M1 macrophages in RA synovial tissue. Furthermore,the expression of lncRNA HCP5 in RA synovial cells was up-regulated. Conclusion lncRNA HCP5 expression is up-regulated in RA synovial tissue and potentially associated with immune cells infiltration.

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