斑马鱼drspin-1基因的克隆与鉴定

W. Xiao
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引用次数: 1

摘要

自旋蛋白家族具有保守的Spin/Ssty基序,在配子体发生和早期胚胎发育中起重要作用。到目前为止,还没有在斑马鱼中发现自旋基因。为了从斑马鱼中分离出Spin基因的全长cDNA,我们根据Spin蛋白家族的保守序列设计了两个简并引物。从斑马鱼成熟卵的SMART cDNA文库中分离到DrSpin-1和DrSpin-2两个260 bp的DNA片段。序列同源性分析表明,DrSpin-1蛋白与CagSpin蛋白的氨基酸序列同源性高达81%,DrSpin-2蛋白与OlSpinB和OlSpinC的氨基酸序列同源性较高。根据DrSpin-1的260 bp DNA序列设计两个特异性引物进行RACE聚合酶链反应,并从上述SMART cDNA文库中分离到DrSpin-1的全长cDNA序列。序列分析显示,DrSpin-1 cDNA包含1082个碱基对,771个碱基对的开放阅读框编码257个氨基酸,包含3个保守的Spin/Ssty动机和8个可能的磷酸化位点。这些数据证实了克隆的DrSpin-1基因属于Spin基因家族。此外,利用CLUSTRA W软件对其他鱼类的CagSpin蛋白序列和DrSpin-1蛋白序列进行多重比对分析,结果表明,DrSpin-1蛋白与鲫鱼的CagSpin蛋白同源性最高。因此,我们认为DrSpin-1在斑马鱼中可能具有与CagSpin相似的表达模式,并可能在卵发生和受精过程中发挥重要的调控作用。本研究为进一步研究旋转蛋白在斑马鱼中的功能提供了线索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
CLONING AND CHARACTERIZATION OF DRSPIN-1 GENE IN ZEBRAFISH (DANIO RERIO)
Spin protein family,with the conserved Spin/Ssty motif,play important role during gametogenesis and early embryo development.So far,no Spin genes have been identified in zebrafish,Danio rerio.In this study,to isolate the full-length cDNA of Spin gene from zebrafish,we designed two degenerate primers according to the conserved sequences of Spin protein family.Two 260 bp DNA fragments of DrSpin-1 and DrSpin-2 were isolated from SMART cDNA library of zebrafish mature eggs.The sequence homologous analysis indicated the identity of amino acid sequences between DrSpin-1 protein and CagSpin protein got up to 81%,and DrSpin-2 protein showed greater sequence identity with OlSpinB and OlSpinC.Further,two specific primers were designed according to the 260 bp DNA sequence of DrSpin-1 for RACE polymerase chain reaction,and the full-length cDNA sequences of DrSpin-1 was isolated from the SMART cDNA library referred above.Sequence analysis revealed DrSpin-1 cDNA contained 1082 base pairs with a 771 base pairs open reading frame encoding 257 amino acids and including three conserved Spin/Ssty motives and eight possible phosphorylation sites.These data confirmed the cloned DrSpin-1 gene was one of Spin gene family.Furthermore,the multiple alignments analysis of DrSpin-1 protein sequence and Spin protein sequences in other fishes by CLUSTRA W indicated that DrSpin-1 protein had the highest homology to CagSpin protein in gibel carp.Therefore,we suggested DrSpin-1 in zebrafish might have the similar expression pattern to CagSpin,and might play important roles in regulation during oogenesis and fertilization.Our studies provide the clue to further functional research of Spin in zefrafish.
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