Lu Cui-yun, Geng Longwu, Li Chao, Cheng Lei, Sun Xiao-wen, Xu Wei
{"title":"利用微卫星标记分析头鲈的遗传结构和生长性状","authors":"Lu Cui-yun, Geng Longwu, Li Chao, Cheng Lei, Sun Xiao-wen, Xu Wei","doi":"10.3724/SP.J.1231.2013.38607","DOIUrl":null,"url":null,"abstract":"Barbus capito is an endemic species in the Aral Sea of Uzbekistan.It is well-known for its salt tolerance and fast growth,and is a valuable food source in the region.The species was introduced to China in 2003 and F1 was obtained using artificial propagation in 2010.As an introduced species,B.capito has the relatively limited genetic resources due to the small founder population size.It is very important to effectively protect and utilize the existing gene resources in breeding practice.In this study,24 microsatellite markers were selected to analyze the genetic structure in cultured F1 population including 96 individuals.A total of 74 alleles were detected and the length of fragments ranged from 109 to 367 bp.The number of alleles per locus was from 2 to 5,and the mean was 3.0833.The effective number of alleles(Ne)ranged from 1.144 5 to 4.626 4 with an average of 2.265 6.The observed heterozygosity(Ho)and the expected heterzygosity(He)varied from 0.135 4 to 1.000 0(mean=0.538 4)and from 0.126 9 to 0.788 1(mean=0.487 2),respectively.The value of polymorphic information content(PIC)was between 0.118 3 and 0.749 0 with an average of 0.428 1,and this result indicated that the level of genetic diversity was moderate(0.25≤PIC0.50).The population accorded with Hardy-Weinberg equilibrium checking by χ2 test except 8 markers including B1,B20,B32,B37,B45,B51,B68,and BC43.In addition,the correlation was analyzed between 24 microsatellite markers and growth traits using the GLM procedure of SPSS 19.0.As a result,there were 8 markers that had a significant(P0.05)impact on growth traits.Six markers including B1,B20,B45,B51,B59,and BC38 had a significant(P0.05)impact on body weight,length,height,and thickness.B26 had a significant(P0.05)impact on body weight,height,and thickness.BC3 had a significant(P0.05)impact on body weight and length.Superior genotypes were obtained using Duncan's multiple comparison.","PeriodicalId":15710,"journal":{"name":"水产学报","volume":"37 1","pages":"1121-1128"},"PeriodicalIF":0.0000,"publicationDate":"2013-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Analysis of genetic structure and growth traits in Barbus capito using microsatellite markers\",\"authors\":\"Lu Cui-yun, Geng Longwu, Li Chao, Cheng Lei, Sun Xiao-wen, Xu Wei\",\"doi\":\"10.3724/SP.J.1231.2013.38607\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Barbus capito is an endemic species in the Aral Sea of Uzbekistan.It is well-known for its salt tolerance and fast growth,and is a valuable food source in the region.The species was introduced to China in 2003 and F1 was obtained using artificial propagation in 2010.As an introduced species,B.capito has the relatively limited genetic resources due to the small founder population size.It is very important to effectively protect and utilize the existing gene resources in breeding practice.In this study,24 microsatellite markers were selected to analyze the genetic structure in cultured F1 population including 96 individuals.A total of 74 alleles were detected and the length of fragments ranged from 109 to 367 bp.The number of alleles per locus was from 2 to 5,and the mean was 3.0833.The effective number of alleles(Ne)ranged from 1.144 5 to 4.626 4 with an average of 2.265 6.The observed heterozygosity(Ho)and the expected heterzygosity(He)varied from 0.135 4 to 1.000 0(mean=0.538 4)and from 0.126 9 to 0.788 1(mean=0.487 2),respectively.The value of polymorphic information content(PIC)was between 0.118 3 and 0.749 0 with an average of 0.428 1,and this result indicated that the level of genetic diversity was moderate(0.25≤PIC0.50).The population accorded with Hardy-Weinberg equilibrium checking by χ2 test except 8 markers including B1,B20,B32,B37,B45,B51,B68,and BC43.In addition,the correlation was analyzed between 24 microsatellite markers and growth traits using the GLM procedure of SPSS 19.0.As a result,there were 8 markers that had a significant(P0.05)impact on growth traits.Six markers including B1,B20,B45,B51,B59,and BC38 had a significant(P0.05)impact on body weight,length,height,and thickness.B26 had a significant(P0.05)impact on body weight,height,and thickness.BC3 had a significant(P0.05)impact on body weight and length.Superior genotypes were obtained using Duncan's multiple comparison.\",\"PeriodicalId\":15710,\"journal\":{\"name\":\"水产学报\",\"volume\":\"37 1\",\"pages\":\"1121-1128\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2013-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"水产学报\",\"FirstCategoryId\":\"1091\",\"ListUrlMain\":\"https://doi.org/10.3724/SP.J.1231.2013.38607\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Environmental Science\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"水产学报","FirstCategoryId":"1091","ListUrlMain":"https://doi.org/10.3724/SP.J.1231.2013.38607","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Environmental Science","Score":null,"Total":0}
Analysis of genetic structure and growth traits in Barbus capito using microsatellite markers
Barbus capito is an endemic species in the Aral Sea of Uzbekistan.It is well-known for its salt tolerance and fast growth,and is a valuable food source in the region.The species was introduced to China in 2003 and F1 was obtained using artificial propagation in 2010.As an introduced species,B.capito has the relatively limited genetic resources due to the small founder population size.It is very important to effectively protect and utilize the existing gene resources in breeding practice.In this study,24 microsatellite markers were selected to analyze the genetic structure in cultured F1 population including 96 individuals.A total of 74 alleles were detected and the length of fragments ranged from 109 to 367 bp.The number of alleles per locus was from 2 to 5,and the mean was 3.0833.The effective number of alleles(Ne)ranged from 1.144 5 to 4.626 4 with an average of 2.265 6.The observed heterozygosity(Ho)and the expected heterzygosity(He)varied from 0.135 4 to 1.000 0(mean=0.538 4)and from 0.126 9 to 0.788 1(mean=0.487 2),respectively.The value of polymorphic information content(PIC)was between 0.118 3 and 0.749 0 with an average of 0.428 1,and this result indicated that the level of genetic diversity was moderate(0.25≤PIC0.50).The population accorded with Hardy-Weinberg equilibrium checking by χ2 test except 8 markers including B1,B20,B32,B37,B45,B51,B68,and BC43.In addition,the correlation was analyzed between 24 microsatellite markers and growth traits using the GLM procedure of SPSS 19.0.As a result,there were 8 markers that had a significant(P0.05)impact on growth traits.Six markers including B1,B20,B45,B51,B59,and BC38 had a significant(P0.05)impact on body weight,length,height,and thickness.B26 had a significant(P0.05)impact on body weight,height,and thickness.BC3 had a significant(P0.05)impact on body weight and length.Superior genotypes were obtained using Duncan's multiple comparison.
水产学报Environmental Science-Management, Monitoring, Policy and Law
CiteScore
1.40
自引率
0.00%
发文量
5213
期刊介绍:
"Fisheries of" mainly reflects the results of scientific research and development of the direction of aquaculture for domestic and foreign academic exchanges Fisheries Service. Mainly basic research published in Fisheries, aquaculture and proliferation of fishing waters environmental protection, preservation of aquatic products processing and utilization, fishing equipment, and other aspects of mechanical papers, research briefings and reviewed.