基于核多角体病毒分子特征的西爪哇茂物棉铃虫幼虫鉴定(鳞翅目:夜蛾科)

R. Kusumah, Trendy Hartanto, F. Kurniawati
{"title":"基于核多角体病毒分子特征的西爪哇茂物棉铃虫幼虫鉴定(鳞翅目:夜蛾科)","authors":"R. Kusumah, Trendy Hartanto, F. Kurniawati","doi":"10.5994/jei.19.2.127","DOIUrl":null,"url":null,"abstract":"Nucleopolyhedrovirus (NPV) is a potential biological control agent recommended to control corn cob borer larvae (Helicoverpa armigera Huber). NPV characters can be studied using various detection and identification methods. One technique to study the character of NPV is polymerase chain reaction (PCR) followed by analysis of the results of nucleotide and amino acid sequences. The molecular character of NPV in infected H. armigera larvae in corn plantations in Cibeureum Village, Dramaga District, Bogor Regency using DNA polymerase partial gene sequences needs to be done. The methods used to study the character of the NPV consisted of DNA isolation using a modified CTAB method, partial gene amplification of DNA polymerase using HearNPVF1 and HearNPVR1, and analysis of the level of homology of nucleotide and amino acid sequences compared to other countries and phylogeny. PCR amplification using specific primers was successfully carried out with the HearNPV DNA polymerase partial gene DNA band measuring about 1,200 bp. Phylogenetic analysis was also successfully carried out and showed that there was a high relationship between HearNPV isolates from Indonesia (Bogor, West Java) and NPV isolates that infect Helicoverpa from other countries such as: Spain, Australia, the Netherlands, India, Brazil, Russia, and China with nucleotide and amino acid homology values ​​of 99%. HearNPV isolates from Bogor were in the same group as NPVs that attacked the Genus Helicoverpa from other countries, while NPVs from other genera were in separate groups based on phylogenetic analysis using Mega 7 software.","PeriodicalId":31609,"journal":{"name":"Jurnal Entomologi Indonesia","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identifikasi berbasis karakter molekuler Nucleopolyhedrovirus pada larva Helicoverpa armigera Hubner (Lepidoptera: Noctuidae) asal Bogor, Jawa Barat\",\"authors\":\"R. Kusumah, Trendy Hartanto, F. Kurniawati\",\"doi\":\"10.5994/jei.19.2.127\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Nucleopolyhedrovirus (NPV) is a potential biological control agent recommended to control corn cob borer larvae (Helicoverpa armigera Huber). NPV characters can be studied using various detection and identification methods. One technique to study the character of NPV is polymerase chain reaction (PCR) followed by analysis of the results of nucleotide and amino acid sequences. The molecular character of NPV in infected H. armigera larvae in corn plantations in Cibeureum Village, Dramaga District, Bogor Regency using DNA polymerase partial gene sequences needs to be done. The methods used to study the character of the NPV consisted of DNA isolation using a modified CTAB method, partial gene amplification of DNA polymerase using HearNPVF1 and HearNPVR1, and analysis of the level of homology of nucleotide and amino acid sequences compared to other countries and phylogeny. PCR amplification using specific primers was successfully carried out with the HearNPV DNA polymerase partial gene DNA band measuring about 1,200 bp. Phylogenetic analysis was also successfully carried out and showed that there was a high relationship between HearNPV isolates from Indonesia (Bogor, West Java) and NPV isolates that infect Helicoverpa from other countries such as: Spain, Australia, the Netherlands, India, Brazil, Russia, and China with nucleotide and amino acid homology values ​​of 99%. HearNPV isolates from Bogor were in the same group as NPVs that attacked the Genus Helicoverpa from other countries, while NPVs from other genera were in separate groups based on phylogenetic analysis using Mega 7 software.\",\"PeriodicalId\":31609,\"journal\":{\"name\":\"Jurnal Entomologi Indonesia\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-07-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Jurnal Entomologi Indonesia\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.5994/jei.19.2.127\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Jurnal Entomologi Indonesia","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.5994/jei.19.2.127","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

核多角体病毒(NPV)是一种有潜力的生物防治剂,被推荐用于防治玉米螟幼虫。NPV特性可以通过各种检测和识别方法来研究。研究NPV特性的一种技术是聚合酶链反应(PCR),然后对核苷酸和氨基酸序列进行分析。利用DNA聚合酶部分基因序列对茂物县Dramaga区Cibeureum村玉米种植园感染的棉蚜幼虫NPV的分子特征进行研究。采用改良的CTAB法进行DNA分离,采用HearNPVF1和HearNPVR1进行DNA聚合酶部分基因扩增,与国外核苷酸和氨基酸序列的同源性分析和系统发育分析。利用特异性引物成功扩增出HearNPV DNA聚合酶部分基因DNA条带,长度约为1200 bp。系统发育分析结果表明,来自印度尼西亚(西爪哇茂物)的甲型h1n1流感病毒分离株与来自西班牙、澳大利亚、荷兰、印度、巴西、俄罗斯和中国的感染Helicoverpa的甲型h1n1流感病毒分离株具有高度的相关性,核苷酸和氨基酸同源性值为99%。根据Mega 7软件的系统发育分析,茂物的HearNPV分离株与来自其他国家的攻击Helicoverpa属的npv属在同一组,而来自其他属的npv分别在不同的组。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identifikasi berbasis karakter molekuler Nucleopolyhedrovirus pada larva Helicoverpa armigera Hubner (Lepidoptera: Noctuidae) asal Bogor, Jawa Barat
Nucleopolyhedrovirus (NPV) is a potential biological control agent recommended to control corn cob borer larvae (Helicoverpa armigera Huber). NPV characters can be studied using various detection and identification methods. One technique to study the character of NPV is polymerase chain reaction (PCR) followed by analysis of the results of nucleotide and amino acid sequences. The molecular character of NPV in infected H. armigera larvae in corn plantations in Cibeureum Village, Dramaga District, Bogor Regency using DNA polymerase partial gene sequences needs to be done. The methods used to study the character of the NPV consisted of DNA isolation using a modified CTAB method, partial gene amplification of DNA polymerase using HearNPVF1 and HearNPVR1, and analysis of the level of homology of nucleotide and amino acid sequences compared to other countries and phylogeny. PCR amplification using specific primers was successfully carried out with the HearNPV DNA polymerase partial gene DNA band measuring about 1,200 bp. Phylogenetic analysis was also successfully carried out and showed that there was a high relationship between HearNPV isolates from Indonesia (Bogor, West Java) and NPV isolates that infect Helicoverpa from other countries such as: Spain, Australia, the Netherlands, India, Brazil, Russia, and China with nucleotide and amino acid homology values ​​of 99%. HearNPV isolates from Bogor were in the same group as NPVs that attacked the Genus Helicoverpa from other countries, while NPVs from other genera were in separate groups based on phylogenetic analysis using Mega 7 software.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
18
审稿时长
32 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信