P. Shivamurthy, T. N. Nagabhushan, B. Prasad, V. Basavaraj
{"title":"用于组织病理学图像核分割的形态学驱动的梯度和标记控制的距离正则化水平集","authors":"P. Shivamurthy, T. N. Nagabhushan, B. Prasad, V. Basavaraj","doi":"10.1504/IJSISE.2019.10022426","DOIUrl":null,"url":null,"abstract":"The extraction of suitable biomarkers over a tissue image plays a vital role in the diagnosis and prognosis of cancer disease. Nuclear pleomorphism is one such trait, which serves as an important shape-based biomarker. An effective segmentation of the nuclei objects leads to an accurate diagnosis by an expert pathologist, which otherwise would be erroneous due to inter and intra-observer variability. In this research, a novel approach for segmenting the nuclei objects, using distance regularised level sets (DRLS), has been presented. It is shown that the shape prior based morphological transformation of the image achieves: a) centroid detection for accurate contour initialisation; b) gradient computation for an effective contour evolution. Experiments have been conducted on benign and malignant tissue images followed by a performance study using the object detection and the overlap resolution accuracy. Segmentation accuracy is assessed in comparison with the geodesic active contours, based on the ground truth.","PeriodicalId":56359,"journal":{"name":"International Journal of Signal and Imaging Systems Engineering","volume":" ","pages":""},"PeriodicalIF":0.6000,"publicationDate":"2019-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A morphologically driven gradient and marker controlled distance regularised level sets for nuclear segmentation in histopathological images\",\"authors\":\"P. Shivamurthy, T. N. Nagabhushan, B. Prasad, V. Basavaraj\",\"doi\":\"10.1504/IJSISE.2019.10022426\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The extraction of suitable biomarkers over a tissue image plays a vital role in the diagnosis and prognosis of cancer disease. Nuclear pleomorphism is one such trait, which serves as an important shape-based biomarker. An effective segmentation of the nuclei objects leads to an accurate diagnosis by an expert pathologist, which otherwise would be erroneous due to inter and intra-observer variability. In this research, a novel approach for segmenting the nuclei objects, using distance regularised level sets (DRLS), has been presented. It is shown that the shape prior based morphological transformation of the image achieves: a) centroid detection for accurate contour initialisation; b) gradient computation for an effective contour evolution. Experiments have been conducted on benign and malignant tissue images followed by a performance study using the object detection and the overlap resolution accuracy. Segmentation accuracy is assessed in comparison with the geodesic active contours, based on the ground truth.\",\"PeriodicalId\":56359,\"journal\":{\"name\":\"International Journal of Signal and Imaging Systems Engineering\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.6000,\"publicationDate\":\"2019-07-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Signal and Imaging Systems Engineering\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1504/IJSISE.2019.10022426\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Engineering\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Signal and Imaging Systems Engineering","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1504/IJSISE.2019.10022426","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Engineering","Score":null,"Total":0}
A morphologically driven gradient and marker controlled distance regularised level sets for nuclear segmentation in histopathological images
The extraction of suitable biomarkers over a tissue image plays a vital role in the diagnosis and prognosis of cancer disease. Nuclear pleomorphism is one such trait, which serves as an important shape-based biomarker. An effective segmentation of the nuclei objects leads to an accurate diagnosis by an expert pathologist, which otherwise would be erroneous due to inter and intra-observer variability. In this research, a novel approach for segmenting the nuclei objects, using distance regularised level sets (DRLS), has been presented. It is shown that the shape prior based morphological transformation of the image achieves: a) centroid detection for accurate contour initialisation; b) gradient computation for an effective contour evolution. Experiments have been conducted on benign and malignant tissue images followed by a performance study using the object detection and the overlap resolution accuracy. Segmentation accuracy is assessed in comparison with the geodesic active contours, based on the ground truth.