韩国特有种铁线莲(毛茛科)叶绿体全基因组序列

IF 0.8 Q4 PLANT SCIENCES

KOREAN JOURNAL OF PLANT TAXONOMY Pub Date : 2022-12-31 DOI:10.11110/kjpt.2022.52.4.262

B. Park, Young-Jong Jang, D. Son, Hee-Young Gil, Sang-Chul Kim

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引用次数: 0

摘要

毛茛科铁线莲(Clematis calcicola J. S. Kim)叶绿体全基因组(cp genome)全长159,655 bp。它由大的(79,451 bp)和小的(18,126 bp)单拷贝区域和一对相同的反向重复序列(31,039 bp)组成。基因组包含92个蛋白质编码基因、36个转移RNA基因、8个核糖体RNA基因和2个假基因。基于19个分类群cp基因组的系统发育分析表明，我们的cp基因组与已知的朝鲜半岛特有物种C. calcicola的cp基因组具有较高的相似性。本文报道的毛茛cp全基因组序列为毛茛科植物的系统发育和进化研究提供了重要信息。

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Complete chloroplast genome sequence of Clematis calcicola (Ranunculaceae), a species endemic to Korea

The complete chloroplast genome (cp genome) sequence of Clematis calcicola J. S. Kim (Ranunculaceae) is 159,655 bp in length. It consists of large (79,451 bp) and small (18,126 bp) single-copy regions and a pair of identical inverted repeats (31,039 bp). The genome contains 92 protein-coding genes, 36 transfer RNA genes, eight ribosomal RNA genes, and two pseudogenes. A phylogenetic analysis based on the cp genome of 19 taxa showed high similarity between our cp genome and data published for C. calcicola, which is recognized as a species endemic to the Korean Peninsula. The complete cp genome sequence of C. calcicola reported here provides important information for future phylogenetic and evolutionary studies of Ranunculaceae.

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来源期刊

KOREAN JOURNAL OF PLANT TAXONOMY Agricultural and Biological Sciences-Plant Science

CiteScore

1.50

自引率

40.00%

发文量