Hazal Kandemir, K. Dukik, Marcus de Melo Teixeira, J. B. Stielow, Fatima Zohra Delma, A. Al‐Hatmi, Sarah A. Ahmed, M. Ilkit, G. D. de Hoog
{"title":"Onygenales目的系统发育与生态再评价","authors":"Hazal Kandemir, K. Dukik, Marcus de Melo Teixeira, J. B. Stielow, Fatima Zohra Delma, A. Al‐Hatmi, Sarah A. Ahmed, M. Ilkit, G. D. de Hoog","doi":"10.21203/rs.3.rs-1049506/v1","DOIUrl":null,"url":null,"abstract":"The order Onygenales is classified in the class Eurotiomycetes of the subphylum Pezizomycotina. Families in this order have classically been isolated from soil and dung, and two lineages contain causative agents of superficial, cutaneous and systemic infections in mammals. The ecology and habitat choices of the species are driven mainly by the keratin and cellulose degradation abilities. The present study aimed to investigate whether the ecological trends of the members of Onygenales can be interpreted in an evolutionary sense, linking phylogenetic parameters with habitat preferences, to achieve polyphasic definitions of the main taxonomic groups. Evolutionary processes were estimated by multiple gene genealogies and divergence time analysis. Previously described families, namely, Arthrodermataceae, Ajellomycetaceae, Ascosphaeraceae, Eremascaceae, Gymnoascaceae, Onygenaceae and Spiromastigoidaceae, were accepted in Onygenales, and two new families, Malbrancheaceae and Neogymnomycetaceae, were introduced. A number of species could not be assigned to any of the defined families. Our study provides a revised overview of the main lines of taxonomy of Onygenales, supported by multilocus analyses of ITS, LSU, TUB, TEF1, TEF3, RPB1, RPB2, and ribosomal protein 60S L10 (L1) (RP60S) sequences, combined with available data on ecology, physiology, morphology, and genomics.","PeriodicalId":12471,"journal":{"name":"Fungal Diversity","volume":"115 1","pages":"1 - 72"},"PeriodicalIF":24.5000,"publicationDate":"2021-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"15","resultStr":"{\"title\":\"Phylogenetic and ecological reevaluation of the order Onygenales\",\"authors\":\"Hazal Kandemir, K. Dukik, Marcus de Melo Teixeira, J. B. Stielow, Fatima Zohra Delma, A. Al‐Hatmi, Sarah A. Ahmed, M. Ilkit, G. D. de Hoog\",\"doi\":\"10.21203/rs.3.rs-1049506/v1\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The order Onygenales is classified in the class Eurotiomycetes of the subphylum Pezizomycotina. Families in this order have classically been isolated from soil and dung, and two lineages contain causative agents of superficial, cutaneous and systemic infections in mammals. The ecology and habitat choices of the species are driven mainly by the keratin and cellulose degradation abilities. The present study aimed to investigate whether the ecological trends of the members of Onygenales can be interpreted in an evolutionary sense, linking phylogenetic parameters with habitat preferences, to achieve polyphasic definitions of the main taxonomic groups. Evolutionary processes were estimated by multiple gene genealogies and divergence time analysis. Previously described families, namely, Arthrodermataceae, Ajellomycetaceae, Ascosphaeraceae, Eremascaceae, Gymnoascaceae, Onygenaceae and Spiromastigoidaceae, were accepted in Onygenales, and two new families, Malbrancheaceae and Neogymnomycetaceae, were introduced. A number of species could not be assigned to any of the defined families. Our study provides a revised overview of the main lines of taxonomy of Onygenales, supported by multilocus analyses of ITS, LSU, TUB, TEF1, TEF3, RPB1, RPB2, and ribosomal protein 60S L10 (L1) (RP60S) sequences, combined with available data on ecology, physiology, morphology, and genomics.\",\"PeriodicalId\":12471,\"journal\":{\"name\":\"Fungal Diversity\",\"volume\":\"115 1\",\"pages\":\"1 - 72\"},\"PeriodicalIF\":24.5000,\"publicationDate\":\"2021-11-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"15\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Fungal Diversity\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.21203/rs.3.rs-1049506/v1\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MYCOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fungal Diversity","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.21203/rs.3.rs-1049506/v1","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MYCOLOGY","Score":null,"Total":0}
Phylogenetic and ecological reevaluation of the order Onygenales
The order Onygenales is classified in the class Eurotiomycetes of the subphylum Pezizomycotina. Families in this order have classically been isolated from soil and dung, and two lineages contain causative agents of superficial, cutaneous and systemic infections in mammals. The ecology and habitat choices of the species are driven mainly by the keratin and cellulose degradation abilities. The present study aimed to investigate whether the ecological trends of the members of Onygenales can be interpreted in an evolutionary sense, linking phylogenetic parameters with habitat preferences, to achieve polyphasic definitions of the main taxonomic groups. Evolutionary processes were estimated by multiple gene genealogies and divergence time analysis. Previously described families, namely, Arthrodermataceae, Ajellomycetaceae, Ascosphaeraceae, Eremascaceae, Gymnoascaceae, Onygenaceae and Spiromastigoidaceae, were accepted in Onygenales, and two new families, Malbrancheaceae and Neogymnomycetaceae, were introduced. A number of species could not be assigned to any of the defined families. Our study provides a revised overview of the main lines of taxonomy of Onygenales, supported by multilocus analyses of ITS, LSU, TUB, TEF1, TEF3, RPB1, RPB2, and ribosomal protein 60S L10 (L1) (RP60S) sequences, combined with available data on ecology, physiology, morphology, and genomics.
期刊介绍:
Fungal Diversity, the official journal of the Kunming Institute of Botany of the Chinese Academy of Sciences, is an international, peer-reviewed journal covering all aspects of mycology. It prioritizes papers on biodiversity, systematic, and molecular phylogeny. While it welcomes novel research and review articles, authors aiming to publish checklists are advised to seek regional journals, and the introduction of new species and genera should generally be supported by molecular data.
Published articles undergo peer review and are accessible online first with a permanent DOI, making them citable as the official Version of Record according to NISO RP-8-2008 standards. Any necessary corrections after online publication require the publication of an Erratum.