从巴西腐木样品中分离的木聚糖降解酵母菌Sugiyamaella xylanicola UFMG-CM-Y1884T基因组序列草图

Thiago M. Batista , Rennan G. Moreira , Heron O. Hilário , Camila G. Morais , Glória R. Franco , Luiz H. Rosa , Carlos A. Rosa
{"title":"从巴西腐木样品中分离的木聚糖降解酵母菌Sugiyamaella xylanicola UFMG-CM-Y1884T基因组序列草图","authors":"Thiago M. Batista ,&nbsp;Rennan G. Moreira ,&nbsp;Heron O. Hilário ,&nbsp;Camila G. Morais ,&nbsp;Glória R. Franco ,&nbsp;Luiz H. Rosa ,&nbsp;Carlos A. Rosa","doi":"10.1016/j.gdata.2017.01.006","DOIUrl":null,"url":null,"abstract":"<div><p>We present the draft genome sequence of the type strain of the yeast <em>Sugiyamaella xylanicola</em> UFMG-CM-Y1884<sup>T</sup> (=<!--> <!-->UFMG-CA-32.1<sup>T</sup> <!-->=<!--> <!-->CBS 12683<sup>T</sup>), a xylan-degrading species capable of fermenting <span>d</span>-xylose to ethanol. The assembled genome has a size of ~<!--> <!-->13.7<!--> <!-->Mb and a GC content of 33.8% and contains 5971 protein-coding genes. We identified 15 genes with significant similarity to the <span>d</span>-xylose reductase gene from several other fungal species. The draft genome assembled from whole-genome shotgun sequencing of the yeast <em>Sugiyamaella xylanicola</em> UFMG-CM-Y1884<sup>T</sup> (=<!--> <!-->UFMG-CA-32.1<sup>T</sup> <!-->=<!--> <!-->CBS 12683<sup>T</sup>) has been deposited at DDBJ/ENA/GenBank under the accession number MQSX00000000 under version MQSX01000000.</p></div>","PeriodicalId":56340,"journal":{"name":"Genomics Data","volume":"11 ","pages":"Pages 120-121"},"PeriodicalIF":0.0000,"publicationDate":"2017-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.gdata.2017.01.006","citationCount":"1","resultStr":"{\"title\":\"Draft genome sequence of Sugiyamaella xylanicola UFMG-CM-Y1884T, a xylan-degrading yeast species isolated from rotting wood samples in Brazil\",\"authors\":\"Thiago M. Batista ,&nbsp;Rennan G. Moreira ,&nbsp;Heron O. Hilário ,&nbsp;Camila G. Morais ,&nbsp;Glória R. Franco ,&nbsp;Luiz H. Rosa ,&nbsp;Carlos A. Rosa\",\"doi\":\"10.1016/j.gdata.2017.01.006\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>We present the draft genome sequence of the type strain of the yeast <em>Sugiyamaella xylanicola</em> UFMG-CM-Y1884<sup>T</sup> (=<!--> <!-->UFMG-CA-32.1<sup>T</sup> <!-->=<!--> <!-->CBS 12683<sup>T</sup>), a xylan-degrading species capable of fermenting <span>d</span>-xylose to ethanol. The assembled genome has a size of ~<!--> <!-->13.7<!--> <!-->Mb and a GC content of 33.8% and contains 5971 protein-coding genes. We identified 15 genes with significant similarity to the <span>d</span>-xylose reductase gene from several other fungal species. The draft genome assembled from whole-genome shotgun sequencing of the yeast <em>Sugiyamaella xylanicola</em> UFMG-CM-Y1884<sup>T</sup> (=<!--> <!-->UFMG-CA-32.1<sup>T</sup> <!-->=<!--> <!-->CBS 12683<sup>T</sup>) has been deposited at DDBJ/ENA/GenBank under the accession number MQSX00000000 under version MQSX01000000.</p></div>\",\"PeriodicalId\":56340,\"journal\":{\"name\":\"Genomics Data\",\"volume\":\"11 \",\"pages\":\"Pages 120-121\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2017-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/j.gdata.2017.01.006\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Genomics Data\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2213596017300156\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genomics Data","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2213596017300156","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1

摘要

本文报道了木聚糖降解菌苏吉山菌(Sugiyamaella xylanicola) UFMG-CM-Y1884T (= UFMG-CA-32.1T = CBS 12683T)型菌株的基因组序列草图,该菌株能够将d-木糖发酵成乙醇。组装后的基因组大小约13.7 Mb, GC含量33.8%,包含5971个蛋白编码基因。我们从其他几种真菌物种中鉴定出15个与d-木糖还原酶基因显著相似的基因。通过全基因组鸟枪法测序获得的木杉山菌UFMG-CM-Y1884T (= UFMG-CA-32.1T = CBS 12683T)基因组草图已存入DDBJ/ENA/GenBank,登录号MQSX00000000,版本MQSX01000000。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Draft genome sequence of Sugiyamaella xylanicola UFMG-CM-Y1884T, a xylan-degrading yeast species isolated from rotting wood samples in Brazil

We present the draft genome sequence of the type strain of the yeast Sugiyamaella xylanicola UFMG-CM-Y1884T (= UFMG-CA-32.1T = CBS 12683T), a xylan-degrading species capable of fermenting d-xylose to ethanol. The assembled genome has a size of ~ 13.7 Mb and a GC content of 33.8% and contains 5971 protein-coding genes. We identified 15 genes with significant similarity to the d-xylose reductase gene from several other fungal species. The draft genome assembled from whole-genome shotgun sequencing of the yeast Sugiyamaella xylanicola UFMG-CM-Y1884T (= UFMG-CA-32.1T = CBS 12683T) has been deposited at DDBJ/ENA/GenBank under the accession number MQSX00000000 under version MQSX01000000.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
审稿时长
12 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信