马兜铃(十足目,枝枝目)线粒体全基因组的特征及马兜铃科的系统发育意义

IF 0.6 4区 生物学 Q4 MARINE & FRESHWATER BIOLOGY
Xinjie Liang, Yuman Sun, Yingying Ye, Jiji Li
{"title":"马兜铃(十足目,枝枝目)线粒体全基因组的特征及马兜铃科的系统发育意义","authors":"Xinjie Liang, Yuman Sun, Yingying Ye, Jiji Li","doi":"10.1163/15685403-bja10307","DOIUrl":null,"url":null,"abstract":"\nWe analysed the mitochondrial genome of Aristaeopsis edwardsiana (Johnson, 1868) to understand its origin and evolution. Our study uncovered new insights into its phylogenetic relationships and evolutionary history. The mitogenome of A. edwardsiana is 15 913 bp, contains 37 genes, including 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA) and 22 transfer RNA genes (tRNA). The AT content is 64.98%, with negative AT and GC skews. Our analysis showed that the PCGs of A. edwardsiana and related Aristeidae species underwent purifying selection. The tRNA genes exhibited a typical structure, except trnC and trnS1. The gene order was conserved compared to ancestral decapods. Using species of Dendrobranchiata, we constructed a phylogenetic tree, revealing the relationship of A. edwardsiana within the family Aristeidae. These findings improve our understanding of Decapoda classification and Aristeidae’s evolutionary position, facilitating further phylogenetic investigations. This study may serve as a valuable reference for future research on species of Aristeidae.","PeriodicalId":10834,"journal":{"name":"Crustaceana","volume":" ","pages":""},"PeriodicalIF":0.6000,"publicationDate":"2023-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Characterization of the complete mitochondrial genome of Aristaeopsis edwardsiana (Decapoda, Dendrobranchiata) and the phylogenetic implications for Aristeidae\",\"authors\":\"Xinjie Liang, Yuman Sun, Yingying Ye, Jiji Li\",\"doi\":\"10.1163/15685403-bja10307\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\nWe analysed the mitochondrial genome of Aristaeopsis edwardsiana (Johnson, 1868) to understand its origin and evolution. Our study uncovered new insights into its phylogenetic relationships and evolutionary history. The mitogenome of A. edwardsiana is 15 913 bp, contains 37 genes, including 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA) and 22 transfer RNA genes (tRNA). The AT content is 64.98%, with negative AT and GC skews. Our analysis showed that the PCGs of A. edwardsiana and related Aristeidae species underwent purifying selection. The tRNA genes exhibited a typical structure, except trnC and trnS1. The gene order was conserved compared to ancestral decapods. Using species of Dendrobranchiata, we constructed a phylogenetic tree, revealing the relationship of A. edwardsiana within the family Aristeidae. These findings improve our understanding of Decapoda classification and Aristeidae’s evolutionary position, facilitating further phylogenetic investigations. This study may serve as a valuable reference for future research on species of Aristeidae.\",\"PeriodicalId\":10834,\"journal\":{\"name\":\"Crustaceana\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.6000,\"publicationDate\":\"2023-08-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Crustaceana\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1163/15685403-bja10307\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MARINE & FRESHWATER BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Crustaceana","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1163/15685403-bja10307","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MARINE & FRESHWATER BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

我们分析了Aristaeopsis edwardsiana (Johnson, 1868)的线粒体基因组,以了解其起源和进化。我们的研究揭示了其系统发育关系和进化历史的新见解。edwardsiana有丝分裂基因组全长15 913 bp,包含37个基因,包括13个蛋白质编码基因(PCGs)、2个核糖体RNA基因(rRNA)和22个转移RNA基因(tRNA)。AT含量为64.98%,呈负AT和GC偏态。分析表明,爱德华拟南麻及其近缘Aristeidae种的PCGs存在纯化选择。tRNA基因除trnC和trnS1外均表现出典型的结构。与祖先的十足动物相比,基因顺序是保守的。本文以树枝科(Dendrobranchiata)植物为研究对象,构建了一棵系统发育树,揭示了edwardsiana在Aristeidae科中的亲缘关系。这些发现提高了我们对十足类分类和Aristeidae进化地位的认识,为进一步的系统发育研究提供了依据。本研究可为今后对Aristeidae属植物的研究提供有价值的参考。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Characterization of the complete mitochondrial genome of Aristaeopsis edwardsiana (Decapoda, Dendrobranchiata) and the phylogenetic implications for Aristeidae
We analysed the mitochondrial genome of Aristaeopsis edwardsiana (Johnson, 1868) to understand its origin and evolution. Our study uncovered new insights into its phylogenetic relationships and evolutionary history. The mitogenome of A. edwardsiana is 15 913 bp, contains 37 genes, including 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA) and 22 transfer RNA genes (tRNA). The AT content is 64.98%, with negative AT and GC skews. Our analysis showed that the PCGs of A. edwardsiana and related Aristeidae species underwent purifying selection. The tRNA genes exhibited a typical structure, except trnC and trnS1. The gene order was conserved compared to ancestral decapods. Using species of Dendrobranchiata, we constructed a phylogenetic tree, revealing the relationship of A. edwardsiana within the family Aristeidae. These findings improve our understanding of Decapoda classification and Aristeidae’s evolutionary position, facilitating further phylogenetic investigations. This study may serve as a valuable reference for future research on species of Aristeidae.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Crustaceana
Crustaceana 生物-海洋与淡水生物学
CiteScore
1.30
自引率
33.30%
发文量
52
审稿时长
3 months
期刊介绍: Crustaceana is a leading journal in the world on crustacean research, including the latest papers from all branches of zoology. It provides up-to-date information on aspects such as taxonomy, zoogeography, ecology, physiology, anatomy, genetics, palaeontology, and biometry, and covers all groups of Crustacea. Boasting a large international circulation, Crustaceana provides its readers with an abstract for each article.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信