蛋白质加合物组学:人类血液样本中血清白蛋白和血红蛋白加合物的非靶向筛选方法。

Q2 Biochemistry, Genetics and Molecular Biology
High-Throughput Pub Date : 2019-03-08 DOI:10.3390/ht8010006
Henrik Carlsson, Stephen M Rappaport, Margareta Törnqvist
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引用次数: 40

摘要

亲电试剂在体内的反应产物可以作为人类血液样本中丰富蛋白质血红蛋白(Hb)和人类血清白蛋白(HSA)的加合物进行测量。在过去的十年里,这种加合物的非靶向筛选方法,称为“加合组学”,已经使用液相色谱-质谱法来检测大量以前未知的Hb和HSA加合物。这篇综述介绍了我们实验室分别开发和使用的Hb和HSA加合组学方法。我们讨论了目标蛋白的选择、样品制备、质谱分析、数据评估和检测到的未知加合物鉴定策略等关键方面。在这篇综述中,我们概述了这两种用于蛋白质加合物组学的方法以及从加合物中阐明的前体亲电试剂。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Protein Adductomics: Methodologies for Untargeted Screening of Adducts to Serum Albumin and Hemoglobin in Human Blood Samples.

Protein Adductomics: Methodologies for Untargeted Screening of Adducts to Serum Albumin and Hemoglobin in Human Blood Samples.

Protein Adductomics: Methodologies for Untargeted Screening of Adducts to Serum Albumin and Hemoglobin in Human Blood Samples.

Protein Adductomics: Methodologies for Untargeted Screening of Adducts to Serum Albumin and Hemoglobin in Human Blood Samples.

The reaction products of electrophiles in vivo can be measured as adducts to the abundant proteins, hemoglobin (Hb), and human serum albumin (HSA), in human blood samples. During the last decade, methods for untargeted screening of such adducts, called "adductomics", have used liquid chromatography-mass spectrometry to detect large numbers of previously unknown Hb and HSA adducts. This review presents methodologies that were developed and used in our laboratories for Hb and HSA adductomics, respectively. We discuss critical aspects regarding choice of target protein, sample preparation, mass spectrometry, data evaluation, and strategies for identification of detected unknown adducts. With this review we give an overview of these two methodologies used for protein adductomics and the precursor electrophiles that have been elucidated from the adducts.

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来源期刊
High-Throughput
High-Throughput Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
3.60
自引率
0.00%
发文量
0
审稿时长
9 weeks
期刊介绍: High-Throughput (formerly Microarrays, ISSN 2076-3905) is a multidisciplinary peer-reviewed scientific journal that provides an advanced forum for the publication of studies reporting high-dimensional approaches and developments in Life Sciences, Chemistry and related fields. Our aim is to encourage scientists to publish their experimental and theoretical results based on high-throughput techniques as well as computational and statistical tools for data analysis and interpretation. The full experimental or methodological details must be provided so that the results can be reproduced. There is no restriction on the length of the papers. High-Throughput invites submissions covering several topics, including, but not limited to: -Microarrays -DNA Sequencing -RNA Sequencing -Protein Identification and Quantification -Cell-based Approaches -Omics Technologies -Imaging -Bioinformatics -Computational Biology/Chemistry -Statistics -Integrative Omics -Drug Discovery and Development -Microfluidics -Lab-on-a-chip -Data Mining -Databases -Multiplex Assays
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