[日本福冈县结核分枝杆菌菌株的24位点可变数串联重复分型研究]。

Kekkaku : [Tuberculosis] Pub Date : 2016-07-01
Akira Oishi, Eriko Maeda, Koichi Murakami, Masahiro Nishida, Nobuyuki Sera
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引用次数: 0

摘要

[目的]测定日本福冈地区结核分枝杆菌的基因型。[方法]采用24位点可变数串联重复(VNTR)分型对296例肺结核患者的296株结核分离株进行检测。我们还确定了这些分离株和另外10株是否为北京系。[结果]将296株分离株划分为264种VNTR类型,在24个地区或23个地区(除1个高变区外)将每个集群定义为与VNTR类型相同的分离株重新划分为25个集群。有两个聚集性病例与关西地区流行性病例相同。区域多样性方面,高变区分离物类型差异较大。北京系占所有分离株的78.1%,与关西地区神户系(2009年为78.5%)的分离株比例相近。[讨论]来自福冈县的6株分离株与关西地区的分离株在VNTR型上有重叠,而来自福冈县分离株的聚集性是独特的,这可能是福冈县分离株的一个特征。[结论]这些数据可能对该地区的公共卫生措施有用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[TYPING OF MYCOBACTERIUM TUBERCULOSIS STRAINS IN FUKUOKA PREFECTURE, JAPAN, USING 24-LOCUS VARIABLE-NUMBER TANDEM-REPEAT TYPING].

[Aim] To determine genotypes of Mycobacterium tuberculosis strains in Fukuoka Prefecture, Japan. [Methods] A total of 296 isolates from 296 tuberculosis patients is tested using 24-locus variable-number tandem- repeat (VNTR) typing. We also determined whether these isolates and a further 10 were Beijing lineage. [Results] The 296 isolates were classified into 264 VNTR types, and re-classified into 25 clusters when each cluster was defined as isolates being identical to VNTR types in 24 regions, or in 23 regions with the exception of one hypervariable region. Two clusters were shown to be identical to that of the Kansai regional epidemic. Regarding regional diversity, hypervariable regions showed relatively higher variation of isolate types. The Beijing lineage accounted for 78.1% of all isolates, which was similar to the value obtained from Kobe (78.5% in 2009) in the Kansai region. [Discussion] Six isolates from Fukuoka Prefecture over- lapped with those from Kansai region with respect to domi- nant VNTR type, while clusters from Fukuoka Prefectural isolates were unique, which may be a feature of Fukuoka prefectural isolates. [Conclusion] These data are likely to be useful for public health measures in the area.

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