{"title":"Nigrospora 系统发育再评估:无处不在的内生菌、植物和人类病原体。","authors":"M Wang, F Liu, P W Crous, L Cai","doi":"10.3767/persoonia.2017.39.06","DOIUrl":null,"url":null,"abstract":"<p><p>Species of <i>Nigrospora</i> commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among <i>Nigrospora</i> species remain ambiguous. In this study, <i>Nigrospora</i> (= <i>Khusia</i>) is confirmed as a monophyletic genus belonging to <i>Apiosporaceae</i> (<i>Xylariales</i>), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, <i>TEF1-α</i> and <i>TUB2</i>, in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in <i>Nigrospora</i>, as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed including 12 new species and 1 new combination. Five species are re-described based on an examination of type specimens and/or fresh collections. New species described in this paper include: <i>N. aurantiaca</i>, <i>N. bambusae</i>, <i>N. camelliae-sinensis</i>, <i>N. chinensis</i>, <i>N. guilinensis</i>, <i>N. hainanensis</i>, <i>N. lacticolonia</i>, <i>N. osmanthi</i>, <i>N. pyriformis</i>, <i>N. rubi</i>, <i>N. vesicularis</i> and <i>N. zimmermanii</i>. Furthermore, <i>N. vietnamensis</i> is transferred to <i>Arthrinium.</i> Our results indicate a high level of species diversity within <i>Nigrospora</i>, with a general lack in host specificity. Taxa that cluster basal in <i>Nigrospora</i> have wide host ranges, whereas those that diverged later tend to have narrow host ranges. The currently available data suggest, therefore, that the general evolutionary direction in the genus <i>Nigrospora</i> is from a wide to a narrow host range.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"39 ","pages":"118-142"},"PeriodicalIF":9.5000,"publicationDate":"2017-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/14/a6/per-39-118.PMC5832950.pdf","citationCount":"0","resultStr":"{\"title\":\"Phylogenetic reassessment of <i>Nigrospora</i>: Ubiquitous endophytes, plant and human pathogens.\",\"authors\":\"M Wang, F Liu, P W Crous, L Cai\",\"doi\":\"10.3767/persoonia.2017.39.06\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Species of <i>Nigrospora</i> commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among <i>Nigrospora</i> species remain ambiguous. In this study, <i>Nigrospora</i> (= <i>Khusia</i>) is confirmed as a monophyletic genus belonging to <i>Apiosporaceae</i> (<i>Xylariales</i>), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, <i>TEF1-α</i> and <i>TUB2</i>, in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in <i>Nigrospora</i>, as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed including 12 new species and 1 new combination. Five species are re-described based on an examination of type specimens and/or fresh collections. New species described in this paper include: <i>N. aurantiaca</i>, <i>N. bambusae</i>, <i>N. camelliae-sinensis</i>, <i>N. chinensis</i>, <i>N. guilinensis</i>, <i>N. hainanensis</i>, <i>N. lacticolonia</i>, <i>N. osmanthi</i>, <i>N. pyriformis</i>, <i>N. rubi</i>, <i>N. vesicularis</i> and <i>N. zimmermanii</i>. Furthermore, <i>N. vietnamensis</i> is transferred to <i>Arthrinium.</i> Our results indicate a high level of species diversity within <i>Nigrospora</i>, with a general lack in host specificity. Taxa that cluster basal in <i>Nigrospora</i> have wide host ranges, whereas those that diverged later tend to have narrow host ranges. The currently available data suggest, therefore, that the general evolutionary direction in the genus <i>Nigrospora</i> is from a wide to a narrow host range.</p>\",\"PeriodicalId\":20014,\"journal\":{\"name\":\"Persoonia\",\"volume\":\"39 \",\"pages\":\"118-142\"},\"PeriodicalIF\":9.5000,\"publicationDate\":\"2017-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/14/a6/per-39-118.PMC5832950.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Persoonia\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3767/persoonia.2017.39.06\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2017/7/7 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"MYCOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Persoonia","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3767/persoonia.2017.39.06","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2017/7/7 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"MYCOLOGY","Score":null,"Total":0}
Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens.
Species of Nigrospora commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among Nigrospora species remain ambiguous. In this study, Nigrospora (= Khusia) is confirmed as a monophyletic genus belonging to Apiosporaceae (Xylariales), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, TEF1-α and TUB2, in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in Nigrospora, as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed including 12 new species and 1 new combination. Five species are re-described based on an examination of type specimens and/or fresh collections. New species described in this paper include: N. aurantiaca, N. bambusae, N. camelliae-sinensis, N. chinensis, N. guilinensis, N. hainanensis, N. lacticolonia, N. osmanthi, N. pyriformis, N. rubi, N. vesicularis and N. zimmermanii. Furthermore, N. vietnamensis is transferred to Arthrinium. Our results indicate a high level of species diversity within Nigrospora, with a general lack in host specificity. Taxa that cluster basal in Nigrospora have wide host ranges, whereas those that diverged later tend to have narrow host ranges. The currently available data suggest, therefore, that the general evolutionary direction in the genus Nigrospora is from a wide to a narrow host range.
期刊介绍:
Persoonia aspires to publish papers focusing on the molecular systematics and evolution of fungi. Additionally, it seeks to advance fungal taxonomy by employing a polythetic approach to elucidate the genuine phylogeny and relationships within the kingdom Fungi. The journal is dedicated to disseminating high-quality papers that unravel both known and novel fungal taxa at the DNA level. Moreover, it endeavors to provide fresh insights into evolutionary processes and relationships. The scope of papers considered encompasses research articles, along with topical and book reviews.