模式植物病原体果胶杆菌 SCC1 的基因组序列。

Q3 Biochemistry, Genetics and Molecular Biology

Standards in Genomic Sciences Pub Date : 2017-12-20 eCollection Date: 2017-01-01 DOI:10.1186/s40793-017-0301-z

Outi Niemi, Pia Laine, Patrik Koskinen, Miia Pasanen, Ville Pennanen, Heidi Harjunpää, Johanna Nykyri, Liisa Holm, Lars Paulin, Petri Auvinen, E Tapio Palva, Minna Pirhonen

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引用次数: 0

摘要

果胶杆菌属细菌是具有重要经济价值的植物病原体，可导致多种植物发生软腐病。在此，我们报告了果胶杆菌 SCC1 菌株的基因组序列，这是一种芬兰软腐病模式菌株，于 20 世纪 80 年代初从患病的马铃薯块茎中分离出来。菌株 SCC1 的基因组由一条长达 4,974,798 bp 的环状染色体和一条长达 5524 bp 的环状质粒组成。共预测出 4451 个基因，其中 4349 个为蛋白质编码基因，102 个为 RNA 基因。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

Genome sequence of the model plant pathogen Pectobacterium carotovorum SCC1.

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Genome sequence of the model plant pathogen Pectobacterium carotovorum SCC1.

Bacteria of the genus Pectobacterium are economically important plant pathogens that cause soft rot disease on a wide variety of plant species. Here, we report the genome sequence of Pectobacterium carotovorum strain SCC1, a Finnish soft rot model strain isolated from a diseased potato tuber in the early 1980's. The genome of strain SCC1 consists of one circular chromosome of 4,974,798 bp and one circular plasmid of 5524 bp. In total 4451 genes were predicted, of which 4349 are protein coding and 102 are RNA genes.

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来源期刊

Standards in Genomic Sciences GENETICS & HEREDITY-MICROBIOLOGY

CiteScore

1.44

自引率

0.00%

发文量

审稿时长

6-12 weeks