棉花白叶枯病菌柑橘黄单胞菌的基因组分析。乳突菌MSCT1。

Q3 Biochemistry, Genetics and Molecular Biology

Standards in Genomic Sciences Pub Date : 2017-07-24 eCollection Date: 2017-01-01 DOI:10.1186/s40793-017-0253-3

Kurt C Showmaker, Mark A Arick, Chuan-Yu Hsu, Brigitte E Martin, Xiaoqiang Wang, Jiayuan Jia, Martin J Wubben, Robert L Nichols, Tom W Allen, Daniel G Peterson, Shi-En Lu

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引用次数: 6

摘要

柑橘黄单胞菌。malvacearum是棉花的主要病原菌。在这项研究中，我们报道了柑橘的全基因组。利用长读DNA测序技术组装的malvacearum菌株MSCT1。MSCT1基因组是第一个柑橘X. pv。柑桔malvacearum基因组的完整编码区。Malvacearum转录激活因子样效应物。此外，本研究还提供了功能和结构注释，为未来MSCT1的发病机制研究提供了基础。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1.

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The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1.

Xanthomonas citri pv. malvacearum is a major pathogen of cotton, Gossypium hirsutum L.. In this study we report the complete genome of the X. citri pv. malvacearum strain MSCT1 assembled from long read DNA sequencing technology. The MSCT1 genome is the first X. citri pv. malvacearum genome with complete coding regions for X. citri pv. malvacearum transcriptional activator-like effectors. In addition functional and structural annotations are presented in this study that will provide a foundation for future pathogenesis studies with MSCT1.

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来源期刊

Standards in Genomic Sciences GENETICS & HEREDITY-MICROBIOLOGY

CiteScore

1.44

自引率

0.00%

发文量

审稿时长

6-12 weeks