分析细胞节律的稳健性。

J Wolf, S Becker-Weimann, R Heinrich
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引用次数: 43

摘要

细胞水平的自主振荡对各种定时和信号功能很重要。节律以一种特定的方式取决于环境的影响。特别是,一些节奏的周期已经被证明对某些环境因素非常强大,而另一些节奏对这些因素表现出高度敏感性。讨论了系统对环境变化的鲁棒性来自底层设计原则。然而,缺乏对不同节奏的鲁棒性的比较。在这里,我们分析振荡周期的敏感性相对于参数变化的模型描述振荡钙信号,糖酵解和昼夜节律系统。通过比较相同和不同节律的模型,表明灵敏度取决于振荡机制而不是模型描述的细节。特别是,我们发现钙振荡模型非常敏感,糖酵解振荡模型中等敏感,昼夜节律模型非常稳健。结果讨论了温度对节奏的依赖性。设计原则对振荡器的鲁棒性有什么影响的问题,通过对各种反应链长度具有正反馈和负反馈调节的系统的直接比较,可以更明确地解决。我们发现具有负反馈的系统比具有正反馈的系统具有更强的鲁棒性。调节下反应链长度的增加会导致灵敏度的降低。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Analysing the robustness of cellular rhythms.

Autonomous oscillations at the cellular level are important for various timing and signalling functions. The rhythms depend on environmental influences in a specific manner. In particular, the period of some rhythms has been shown to be very robust to certain environmental factors whereas other rhythms show a high sensitivity towards these factors. It is discussed that the robustness of the systems towards environmental changes results from underlying design principles. However, a comparison of robustness properties of different rhythms is lacking. Here we analyse the sensitivity of the oscillatory period with respect to parameter variations in models describing oscillations in calcium signalling, glycolysis and the circadian system. By comparing models for the same and different rhythms it is shown that the sensitivity depends on the oscillatory mechanism rather than the details of the model description. In particular, we find models of calcium oscillations to be very sensitive, those for glycolytic oscillations intermediately sensitive and models for circadian rhythms very robust. The results are discussed with respect to the temperature dependency of the rhythms. The question of what impact design principles have on the robustness of an oscillator, is addressed more explicitly by a direct comparison of systems with positive and negative feedback regulation for various reaction chain lengths. We find that the systems with negative feedback are more robust than corresponding systems with positive feedback. An increase in the length of the reaction chain under regulation leads to a decrease in sensitivity.

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