IMGT/HLA序列数据库。

Reviews in immunogenetics Pub Date : 2000-01-01
J Robinson, S G Marsh
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引用次数: 0

摘要

IMGT/HLA数据库(wwwebi.ac.uk/imgt/hla/)专门研究HLA系统的多态性基因序列,即人类主要组织相容性复合体(MHC)。该复合体位于人类6号染色体短臂上的6p213区域,包含220多个不同功能的基因。许多基因编码免疫系统的蛋白质,其中包括21个高度多态性的HLA基因,这些基因影响临床移植的结果,并赋予对多种非传染性疾病的易感性。该数据库包含由世卫组织HLA系统因子命名委员会正式认可的所有HLA等位基因序列,并为用户提供检索和分析这些基因的在线工具和设施。这些包括等位基因报告、比对工具和源细胞的详细描述。在线提交工具允许将新序列和确认序列直接提交给世卫组织命名委员会。最新版本(2001年4月1.10.0发布)包含1329个HLA等位基因,61个HLA相关序列,来自EMBL/ GenBank/DDBJ数据库的约3350个成分序列。IMGT/HLA数据库提供了一个模型,将被扩展为提供其他物种多态MHC基因的专业数据库。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The IMGT/HLA sequence database.

The IMGT/HLA database (wwwebi.ac.uk/imgt/hla/) specialises in sequences of the polymorphic genes of the HLA system, the humanmajor histocompatibility complex (MHC). This complex is located within the 6p213 region on the short arm of human chromosome 6 and contains more than 220 genes of diverse function. Many of the genes encode proteins of the immune system and these include the 21 highly polymorphic HLA genes, which influence the outcome of clinical transplantation and confer susceptibility to a wide range of non-infectious diseases. The database contains sequences for all HLA alleles officially recognised by the WHO Nomenclature Committee for Factors of the HLA System and provides users with online tools and facilities for their retrieval and analysis. These include allele reports, alignment tools, and detailed descriptions of the source cells. The online submission tool allows both new and confirmatory sequences to be submitted directly to the WHO Nomenclature Committee. The latest version (release 1.10.0 April 2001) contains 1329 HLA alleles, 61 HLA related sequences, derived from around 3350 component sequences from the EMBL/ GenBank/DDBJ databases. The IMGT/HLA database provides a model that will be extended to provide specialist databases for polymorphic MHC genes of other species.

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