转录组分析表明,大口黑鲈可能会调动肝脏脂质代谢,为适应高渗应激提供能量

IF 3.9 1区 农林科学 Q1 FISHERIES
Xinxin Wang, Chaoyue Deng, Wenyan Lin, Huapeng Chen, Haoran Yu, Shukui Sun, Junlong Sun, Jian Luo, Feibiao Song
{"title":"转录组分析表明,大口黑鲈可能会调动肝脏脂质代谢,为适应高渗应激提供能量","authors":"Xinxin Wang,&nbsp;Chaoyue Deng,&nbsp;Wenyan Lin,&nbsp;Huapeng Chen,&nbsp;Haoran Yu,&nbsp;Shukui Sun,&nbsp;Junlong Sun,&nbsp;Jian Luo,&nbsp;Feibiao Song","doi":"10.1016/j.aquaculture.2025.742646","DOIUrl":null,"url":null,"abstract":"<div><div>As the evaporation of water bodies increases globally, salts are accumulating in oceans, lakes, and rivers, and these increased salinity levels have a major effect on the survival, growth, and development of various organisms. <em>Micropterus salmoides</em> is a freshwater fish that can survive under different salinity levels, including brackish water culture in saline-alkali land; it thus provides an excellent model for studies of environmental salinity adaptation. In this study, culture experiments were conducted for 6 weeks at 4 salinity levels, 0 ‰ (C), 5 ‰ (E1), 10 ‰ (E2), and 15 ‰ (E3), to assess the salinity tolerance and the molecular response to salinity in <em>M. salmoides</em>. The histology of the liver tissues of <em>M. salmoides</em> under different levels of salinity stress was examined, and transcriptome sequencing was performed. As the salinity level increased, liver cells became increasingly deformed, the number of liver cells decreased, and the frequency of cavitation and other types of damage increased. We also examined the activity of antioxidant-related enzymes. As the salinity level increased, superoxide dismutase and catalase activities in the liver of largemouth bass decreased. The antioxidant oxidase activity was significantly lower in the high-salinity group (10 ‰, 15 ‰) than in the low-salinity group (0 ‰, 5 ‰), and the antioxidant oxidase activity was significantly lower in the experimental groups than in the control group. RNA sequencing analysis of liver tissues revealed 725, 1780, and 5669 differentially expressed genes (DEGs) in the high-salinity treatment groups (5 ‰, 10 ‰, and 15 ‰, respectively) compared with the control group (0 ‰). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed that these DEGs were involved in material metabolism, energy metabolism, signal transduction, transcription and translation, and apoptosis of cells, especially lipid and energy metabolism. Further analysis showed that the PPAR and AMPK signaling pathways promoted fatty acid β-oxidation to release energy. DEGs involved in lipid metabolism were significantly up-regulated under high salinity stress, and these included genes encoding acetyl-CoA acyltransferase 2 (ACAA2), hydroxyacyl-CoA dehydrogenase alpha (HADHA), hydroxyacyl-CoA dehydrogenase beta (HADHB), and acyl-CoA dehydrogenase short chain (ACADs), which were associated with the β-oxidation pathway. In sum, largemouth bass adapts to high-salinity environments by regulating the fatty acid β-oxidation pathway and altering the activities of the PPAR and AMPK pathways and related hub genes to increase fat oxidation and release energy. Our results provide new insights into the response of <em>M. salmoides</em> to salinity challenges and enhance our understanding of the molecular basis of the metabolic regulatory mechanisms in this species.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"607 ","pages":"Article 742646"},"PeriodicalIF":3.9000,"publicationDate":"2025-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Transcriptome analysis revealed that largemouth bass (Micropterus salmoides) may mobilize liver lipid metabolism to provide energy for adaptation to hypertonic stress\",\"authors\":\"Xinxin Wang,&nbsp;Chaoyue Deng,&nbsp;Wenyan Lin,&nbsp;Huapeng Chen,&nbsp;Haoran Yu,&nbsp;Shukui Sun,&nbsp;Junlong Sun,&nbsp;Jian Luo,&nbsp;Feibiao Song\",\"doi\":\"10.1016/j.aquaculture.2025.742646\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>As the evaporation of water bodies increases globally, salts are accumulating in oceans, lakes, and rivers, and these increased salinity levels have a major effect on the survival, growth, and development of various organisms. <em>Micropterus salmoides</em> is a freshwater fish that can survive under different salinity levels, including brackish water culture in saline-alkali land; it thus provides an excellent model for studies of environmental salinity adaptation. In this study, culture experiments were conducted for 6 weeks at 4 salinity levels, 0 ‰ (C), 5 ‰ (E1), 10 ‰ (E2), and 15 ‰ (E3), to assess the salinity tolerance and the molecular response to salinity in <em>M. salmoides</em>. The histology of the liver tissues of <em>M. salmoides</em> under different levels of salinity stress was examined, and transcriptome sequencing was performed. As the salinity level increased, liver cells became increasingly deformed, the number of liver cells decreased, and the frequency of cavitation and other types of damage increased. We also examined the activity of antioxidant-related enzymes. As the salinity level increased, superoxide dismutase and catalase activities in the liver of largemouth bass decreased. The antioxidant oxidase activity was significantly lower in the high-salinity group (10 ‰, 15 ‰) than in the low-salinity group (0 ‰, 5 ‰), and the antioxidant oxidase activity was significantly lower in the experimental groups than in the control group. RNA sequencing analysis of liver tissues revealed 725, 1780, and 5669 differentially expressed genes (DEGs) in the high-salinity treatment groups (5 ‰, 10 ‰, and 15 ‰, respectively) compared with the control group (0 ‰). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed that these DEGs were involved in material metabolism, energy metabolism, signal transduction, transcription and translation, and apoptosis of cells, especially lipid and energy metabolism. Further analysis showed that the PPAR and AMPK signaling pathways promoted fatty acid β-oxidation to release energy. DEGs involved in lipid metabolism were significantly up-regulated under high salinity stress, and these included genes encoding acetyl-CoA acyltransferase 2 (ACAA2), hydroxyacyl-CoA dehydrogenase alpha (HADHA), hydroxyacyl-CoA dehydrogenase beta (HADHB), and acyl-CoA dehydrogenase short chain (ACADs), which were associated with the β-oxidation pathway. In sum, largemouth bass adapts to high-salinity environments by regulating the fatty acid β-oxidation pathway and altering the activities of the PPAR and AMPK pathways and related hub genes to increase fat oxidation and release energy. Our results provide new insights into the response of <em>M. salmoides</em> to salinity challenges and enhance our understanding of the molecular basis of the metabolic regulatory mechanisms in this species.</div></div>\",\"PeriodicalId\":8375,\"journal\":{\"name\":\"Aquaculture\",\"volume\":\"607 \",\"pages\":\"Article 742646\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-04-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Aquaculture\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0044848625005320\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"FISHERIES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Aquaculture","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0044848625005320","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"FISHERIES","Score":null,"Total":0}
引用次数: 0

摘要

随着全球水体蒸发的增加,盐在海洋、湖泊和河流中积累,这些增加的盐度水平对各种生物的生存、生长和发育有重大影响。小翼鱼是一种淡水鱼,可以在不同的盐度水平下生存,包括咸碱地的微咸水养殖;因此,它为研究环境盐度适应提供了一个很好的模型。本研究在0‰(C)、5‰(E1)、10‰(E2)和15‰(E3) 4种盐度水平下进行了为期6周的培养实验,以评估salmoides的耐盐性和对盐度的分子响应。研究了不同盐度胁迫下沙棘肝组织的组织学变化,并进行了转录组测序。随着盐度水平的升高,肝细胞变形日益严重,肝细胞数量减少,空化等类型损伤的发生频率增加。我们还检测了抗氧化相关酶的活性。随着盐度的升高,大口黑鲈肝脏超氧化物歧化酶和过氧化氢酶活性降低。高盐度组(10‰、15‰)抗氧化酶活性显著低于低盐度组(0‰、5‰),各试验组抗氧化酶活性显著低于对照组。肝脏组织RNA测序分析显示,高盐度处理组(分别为5‰、10‰和15‰)与对照组(0‰)相比,差异表达基因(deg)分别为725、1780和5669个。基因本体论和京都基因与基因组百科全书途径富集分析表明,这些deg参与细胞的物质代谢、能量代谢、信号转导、转录和翻译以及细胞凋亡,尤其是脂质和能量代谢。进一步分析表明PPAR和AMPK信号通路促进脂肪酸β-氧化释放能量。高盐胁迫下参与脂质代谢的DEGs显著上调,包括编码乙酰辅酶a酰基转移酶2 (ACAA2)、羟酰基辅酶a脱氢酶α (HADHA)、羟酰基辅酶a脱氢酶β (HADHB)和酰基辅酶a脱氢酶短链(ACADs)的基因,这些基因与β-氧化途径相关。综上所述,大口黑鲈适应高盐度环境是通过调节脂肪酸β-氧化途径,改变PPAR和AMPK途径及相关枢纽基因的活性,增加脂肪氧化和释放能量。我们的研究结果为salmoides对盐度挑战的响应提供了新的见解,并增强了我们对该物种代谢调节机制的分子基础的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Transcriptome analysis revealed that largemouth bass (Micropterus salmoides) may mobilize liver lipid metabolism to provide energy for adaptation to hypertonic stress
As the evaporation of water bodies increases globally, salts are accumulating in oceans, lakes, and rivers, and these increased salinity levels have a major effect on the survival, growth, and development of various organisms. Micropterus salmoides is a freshwater fish that can survive under different salinity levels, including brackish water culture in saline-alkali land; it thus provides an excellent model for studies of environmental salinity adaptation. In this study, culture experiments were conducted for 6 weeks at 4 salinity levels, 0 ‰ (C), 5 ‰ (E1), 10 ‰ (E2), and 15 ‰ (E3), to assess the salinity tolerance and the molecular response to salinity in M. salmoides. The histology of the liver tissues of M. salmoides under different levels of salinity stress was examined, and transcriptome sequencing was performed. As the salinity level increased, liver cells became increasingly deformed, the number of liver cells decreased, and the frequency of cavitation and other types of damage increased. We also examined the activity of antioxidant-related enzymes. As the salinity level increased, superoxide dismutase and catalase activities in the liver of largemouth bass decreased. The antioxidant oxidase activity was significantly lower in the high-salinity group (10 ‰, 15 ‰) than in the low-salinity group (0 ‰, 5 ‰), and the antioxidant oxidase activity was significantly lower in the experimental groups than in the control group. RNA sequencing analysis of liver tissues revealed 725, 1780, and 5669 differentially expressed genes (DEGs) in the high-salinity treatment groups (5 ‰, 10 ‰, and 15 ‰, respectively) compared with the control group (0 ‰). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis showed that these DEGs were involved in material metabolism, energy metabolism, signal transduction, transcription and translation, and apoptosis of cells, especially lipid and energy metabolism. Further analysis showed that the PPAR and AMPK signaling pathways promoted fatty acid β-oxidation to release energy. DEGs involved in lipid metabolism were significantly up-regulated under high salinity stress, and these included genes encoding acetyl-CoA acyltransferase 2 (ACAA2), hydroxyacyl-CoA dehydrogenase alpha (HADHA), hydroxyacyl-CoA dehydrogenase beta (HADHB), and acyl-CoA dehydrogenase short chain (ACADs), which were associated with the β-oxidation pathway. In sum, largemouth bass adapts to high-salinity environments by regulating the fatty acid β-oxidation pathway and altering the activities of the PPAR and AMPK pathways and related hub genes to increase fat oxidation and release energy. Our results provide new insights into the response of M. salmoides to salinity challenges and enhance our understanding of the molecular basis of the metabolic regulatory mechanisms in this species.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Aquaculture
Aquaculture 农林科学-海洋与淡水生物学
CiteScore
8.60
自引率
17.80%
发文量
1246
审稿时长
56 days
期刊介绍: Aquaculture is an international journal for the exploration, improvement and management of all freshwater and marine food resources. It publishes novel and innovative research of world-wide interest on farming of aquatic organisms, which includes finfish, mollusks, crustaceans and aquatic plants for human consumption. Research on ornamentals is not a focus of the Journal. Aquaculture only publishes papers with a clear relevance to improving aquaculture practices or a potential application.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信