胶质母细胞瘤中与癌症相关的成纤维细胞浸润相关的生物标志物及其临床预后价值的转化见解。

IF 2.1 4区 医学 Q2 MEDICINE, GENERAL & INTERNAL
International Journal of General Medicine Pub Date : 2025-03-31 eCollection Date: 2025-01-01 DOI:10.2147/IJGM.S512624
Yuxuan Zhang, Qibing Huang
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引用次数: 0

摘要

目的:癌相关成纤维细胞(Cancer-associated fibroblasts, CAFs)能促进肿瘤的进展和迁移。然而,CAFs浸润相关基因在胶质母细胞瘤(GBM)中的作用尚不清楚。方法:从UCSC Xena和CGGA数据库下载gbm相关转录组数据和临床信息。本研究通过“MCPcounter”计算成纤维细胞丰度,通过“WGCNA”鉴定CAFs浸润相关基因。筛选GBM的生物标志物,在此基础上构建生存风险模型(风险评分)和预后模型(nomogram),用于临床预测GBM的生存。此外,我们还进行了功能和突变分析,以进一步研究GBM的发病机制。此外,利用竞争性内源性rna (ceRNA)调控网络揭示了生物标志物的潜在调控作用。结果:46个CAFs浸润相关基因与局灶性黏附相关。鉴定出STC1、BDKRB2、SOCS3、FURIN 4种生物标志物,均为阴性因子。基于风险评分和临床指标构建的Nomogram预测效果较好(AUC > 0.68)。值得注意的是,COL5A1可能是关键基因,它与这四种生物标志物均呈极显著正相关。此外,高危人群的基因与上皮间充质转化(epithelial mesenchymal transition, EMT)和血管生成功能相关。此外,hsa-miR-107可通过TGF-β信号通路调控STC1,进而调控肿瘤的迁移和侵袭。结论:本研究确定了四种与GBM预后相关的CAFs浸润相关生物标志物。这一发现可能有助于加深对CAFs在GBM发展中的作用的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Translational Insights into Cancer-Associated Fibroblast Infiltration-Related Biomarkers in Glioblastoma and Their Clinical Prognostic Value.

Purpose: Cancer-associated fibroblasts (CAFs) could promote the progression and migration of tumors. However, the roles of CAFs infiltration related genes in glioblastoma (GBM) were still unclear.

Methods: GBM-related transcriptome data and clinical information were downloaded from the UCSC Xena and CGGA databases. In this study, the abundance of fibroblasts were calculated by "MCPcounter", and the CAFs infiltration related genes were identified by "WGCNA". Then, the biomarkers of GBM were screened out, and based on it, the survival risk model (risk score) and the prognostic model (nomogram) were constructed to clinical predict the survival of GBM. Moreover, the function and mutation analyses were performed to further study the mechanisms of GBM. Furthermore, the competitive endogenous RNAs (ceRNA) regulatory network were used to reveal the potential regulation of biomarkers.

Results: Totals of 46 CAFs infiltration related genes were associated with focal adhesion. Four biomarkers, including STC1, BDKRB2, SOCS3 and FURIN were identified, and all of them were negative factors. Nomogram constructed based on risk scores and clinical indicators had good predictive performance (AUC > 0.68). Noticeable, COL5A1 might be the key gene, which were extremely positively associated with all these four biomarkers. Besides, the genes in high-risk groups were associated with the functions of epithelial mesenchymal transition (EMT) and angiogenesis. In addition, hsa-miR-107 could regulate STC1 through the TGF-β signaling pathway and further regulating the migration and invasion of tumour.

Conclusion: This study identified four CAFs infiltration related biomarkers associated with the prognosis of GBM. This finding might help to deepen the understanding the roles of CAFs in development of GBM.

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来源期刊
International Journal of General Medicine
International Journal of General Medicine Medicine-General Medicine
自引率
0.00%
发文量
1113
审稿时长
16 weeks
期刊介绍: The International Journal of General Medicine is an international, peer-reviewed, open access journal that focuses on general and internal medicine, pathogenesis, epidemiology, diagnosis, monitoring and treatment protocols. The journal is characterized by the rapid reporting of reviews, original research and clinical studies across all disease areas. A key focus of the journal is the elucidation of disease processes and management protocols resulting in improved outcomes for the patient. Patient perspectives such as satisfaction, quality of life, health literacy and communication and their role in developing new healthcare programs and optimizing clinical outcomes are major areas of interest for the journal. As of 1st April 2019, the International Journal of General Medicine will no longer consider meta-analyses for publication.
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