从斑点海豚胃液中分离的ceti支原体(衰减Stenella)。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Takao Segawa, Yu Nakajima, Keiko Yamamoto, Shoko Kishima, Takuya Itou
{"title":"从斑点海豚胃液中分离的ceti支原体(衰减Stenella)。","authors":"Takao Segawa, Yu Nakajima, Keiko Yamamoto, Shoko Kishima, Takuya Itou","doi":"10.1099/ijsem.0.006712","DOIUrl":null,"url":null,"abstract":"<p><p><i>Ureaplasma</i> sp. (OM1<sup>T</sup>, OM4 and OM7) novel strains were isolated from the gastric fluid of a spotted dolphin (<i>Stenella attenuata</i>). These strains were phenotypically and genotypically characterized, and compared with known species of the genus <i>Ureaplasma</i>. All isolated strains hydrolysed urea and metabolized arginine, but did not produce acid from glucose. All strains were propagated using pleuropneumonia-like organisms medium supplemented with serum and urea under aerobic and anaerobic atmospheric conditions at 37 °C. Transmission electron microscopy revealed a typical mollicute cellular morphology. Analysis of the 16S rRNA gene sequence indicated that the most closely related, validly named type strain was <i>Ureaplasma gallorale</i> ATCC 43346<sup>T</sup> (89.4% similarity). The average nucleotide identity and digital DNA-DNA hybridization values among strain OM1<sup>T</sup> and closely related species were lower than the accepted thresholds for describing novel prokaryotic species at the genomic level. Based on the genomic, phenotypic and phylogenetic properties, the strains represent a novel species of the genus <i>Ureaplasma</i>, for which the name <i>Ureaplasma ceti</i> sp. nov. with type strain OM1<sup>T</sup> (=DSM 116106<sup>T</sup>=JCM 39153<sup>T</sup>) is proposed. The genomic G+C content and draft genome sizes of the type strain were 31.7% and 889 711 bp, respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 3","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Ureaplasma ceti</i> sp. nov. isolated from the gastric fluid of a spotted dolphin (<i>Stenella attenuata</i>).\",\"authors\":\"Takao Segawa, Yu Nakajima, Keiko Yamamoto, Shoko Kishima, Takuya Itou\",\"doi\":\"10.1099/ijsem.0.006712\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Ureaplasma</i> sp. (OM1<sup>T</sup>, OM4 and OM7) novel strains were isolated from the gastric fluid of a spotted dolphin (<i>Stenella attenuata</i>). These strains were phenotypically and genotypically characterized, and compared with known species of the genus <i>Ureaplasma</i>. All isolated strains hydrolysed urea and metabolized arginine, but did not produce acid from glucose. All strains were propagated using pleuropneumonia-like organisms medium supplemented with serum and urea under aerobic and anaerobic atmospheric conditions at 37 °C. Transmission electron microscopy revealed a typical mollicute cellular morphology. Analysis of the 16S rRNA gene sequence indicated that the most closely related, validly named type strain was <i>Ureaplasma gallorale</i> ATCC 43346<sup>T</sup> (89.4% similarity). The average nucleotide identity and digital DNA-DNA hybridization values among strain OM1<sup>T</sup> and closely related species were lower than the accepted thresholds for describing novel prokaryotic species at the genomic level. Based on the genomic, phenotypic and phylogenetic properties, the strains represent a novel species of the genus <i>Ureaplasma</i>, for which the name <i>Ureaplasma ceti</i> sp. nov. with type strain OM1<sup>T</sup> (=DSM 116106<sup>T</sup>=JCM 39153<sup>T</sup>) is proposed. The genomic G+C content and draft genome sizes of the type strain were 31.7% and 889 711 bp, respectively.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 3\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006712\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006712","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

从斑点海豚(减毒Stenella attenuata)胃液中分离到新型脲原体sp. (OM1T、OM4和OM7)。这些菌株具有表型和基因表型特征,并与已知的脲原体属物种进行了比较。所有分离的菌株都能水解尿素和代谢精氨酸,但不能从葡萄糖中产生酸。所有菌株在37℃的好氧和厌氧大气条件下使用添加血清和尿素的胸膜肺炎样生物培养基进行繁殖。透射电镜显示典型的分子细胞形态。16S rRNA基因序列分析表明,最接近的有效命名型菌株为gallorale脲原体ATCC 43346T(相似度为89.4%)。菌株OM1T与近缘种之间的平均核苷酸同一性和数字DNA-DNA杂交值低于基因组水平上描述新原核物种的公认阈值。基于基因组学、表型和系统发育特征,这些菌株代表了脲原体属的一个新种,并提出了类型菌株OM1T (=DSM 116106T=JCM 39153T)的命名方法。该型菌株基因组G+C含量为31.7%,草图基因组大小为889 711 bp。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Ureaplasma ceti sp. nov. isolated from the gastric fluid of a spotted dolphin (Stenella attenuata).

Ureaplasma sp. (OM1T, OM4 and OM7) novel strains were isolated from the gastric fluid of a spotted dolphin (Stenella attenuata). These strains were phenotypically and genotypically characterized, and compared with known species of the genus Ureaplasma. All isolated strains hydrolysed urea and metabolized arginine, but did not produce acid from glucose. All strains were propagated using pleuropneumonia-like organisms medium supplemented with serum and urea under aerobic and anaerobic atmospheric conditions at 37 °C. Transmission electron microscopy revealed a typical mollicute cellular morphology. Analysis of the 16S rRNA gene sequence indicated that the most closely related, validly named type strain was Ureaplasma gallorale ATCC 43346T (89.4% similarity). The average nucleotide identity and digital DNA-DNA hybridization values among strain OM1T and closely related species were lower than the accepted thresholds for describing novel prokaryotic species at the genomic level. Based on the genomic, phenotypic and phylogenetic properties, the strains represent a novel species of the genus Ureaplasma, for which the name Ureaplasma ceti sp. nov. with type strain OM1T (=DSM 116106T=JCM 39153T) is proposed. The genomic G+C content and draft genome sizes of the type strain were 31.7% and 889 711 bp, respectively.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信