Cheng Fu , Xinying Wang , Zhuoyi Liu , Yulong Li , Yaping Zhu , Wei Zhang
{"title":"Trypsin-catalyzed asymmetric aldol reactions of isatins with cyclic ketones and the mechanistic insights on activity differences at theoretical level","authors":"Cheng Fu , Xinying Wang , Zhuoyi Liu , Yulong Li , Yaping Zhu , Wei Zhang","doi":"10.1016/j.jbiotec.2025.03.001","DOIUrl":null,"url":null,"abstract":"<div><div>The promiscuous activity of bovine trypsin was explored in asymmetric aldol reactions between isatins and cyclic ketones. Detailed screening on the conditions with model substrates allowed to provide better catalytic performance. Especially, addition of calcium ion, as a natural stabilizer of trypsin, could improve stereoselectivity although slight losing yield. Furthermore, acceptability of various substrates was examined, a greatly impact on the yield and stereoselectivity have been observed from the different sizes of cyclic ketones. Docking and dynamics simulations were utilized to reveal the possible molecular basis of these phenomena.</div></div>","PeriodicalId":15153,"journal":{"name":"Journal of biotechnology","volume":"402 ","pages":"Pages 14-20"},"PeriodicalIF":4.1000,"publicationDate":"2025-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of biotechnology","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0168165625000549","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Trypsin-catalyzed asymmetric aldol reactions of isatins with cyclic ketones and the mechanistic insights on activity differences at theoretical level
The promiscuous activity of bovine trypsin was explored in asymmetric aldol reactions between isatins and cyclic ketones. Detailed screening on the conditions with model substrates allowed to provide better catalytic performance. Especially, addition of calcium ion, as a natural stabilizer of trypsin, could improve stereoselectivity although slight losing yield. Furthermore, acceptability of various substrates was examined, a greatly impact on the yield and stereoselectivity have been observed from the different sizes of cyclic ketones. Docking and dynamics simulations were utilized to reveal the possible molecular basis of these phenomena.
期刊介绍:
The Journal of Biotechnology has an open access mirror journal, the Journal of Biotechnology: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review.
The Journal provides a medium for the rapid publication of both full-length articles and short communications on novel and innovative aspects of biotechnology. The Journal will accept papers ranging from genetic or molecular biological positions to those covering biochemical, chemical or bioprocess engineering aspects as well as computer application of new software concepts, provided that in each case the material is directly relevant to biotechnological systems. Papers presenting information of a multidisciplinary nature that would not be suitable for publication in a journal devoted to a single discipline, are particularly welcome.