来自印度尼西亚西爪哇肉鸡农场的共生大肠杆菌的抗菌素使用和耐药性:一项农场水平分析。

IF 4.3 2区 医学 Q1 INFECTIOUS DISEASES
Rianna Anwar Sani, Sunandar Sunandar, Annisa Rachmawati, Gian Pertela, Oli Susanti, Kanti Puji Rahayu, Puttik Allamanda, Imron Suandy, Nofita Nurbiyanti, Elvina J Jahja, Budi Purwanto, On Behalf Of Cornerstone Group, Francisca C Velkers, Tagrid Dinar, Jaap A Wagenaar, David C Speksnijder
{"title":"来自印度尼西亚西爪哇肉鸡农场的共生大肠杆菌的抗菌素使用和耐药性:一项农场水平分析。","authors":"Rianna Anwar Sani, Sunandar Sunandar, Annisa Rachmawati, Gian Pertela, Oli Susanti, Kanti Puji Rahayu, Puttik Allamanda, Imron Suandy, Nofita Nurbiyanti, Elvina J Jahja, Budi Purwanto, On Behalf Of Cornerstone Group, Francisca C Velkers, Tagrid Dinar, Jaap A Wagenaar, David C Speksnijder","doi":"10.3390/antibiotics13121181","DOIUrl":null,"url":null,"abstract":"<p><p><b>Background/Objectives:</b> Antimicrobial resistance (AMR) is a global public health threat, with antimicrobial use (AMU) in livestock recognized as a significant driver. This study examines farm-level AMU and AMR as well as the relationship between AMU and AMR on broiler farms in Indonesia. <b>Methods:</b> Data were collected from 19 farms in West Java between 2019 and 2021 to examine AMU in depth across four to five successive production cycles. The correlation between AMU and AMR in commensal <i>Escherichia coli</i> (<i>E. coli</i>) was investigated. AMU was recorded as treatment days per 30-day production cycle, and antimicrobial susceptibility was assessed using epidemiological cut-off (ECOFF) values to differentiate wildtype (WT) and non-wildtype (NWT) <i>E. coli</i>. <b>Results:</b> The average AMU was 12 treatment days per 30-day production cycle, with a wide range of 4 to 22 days. On average, <i>E. coli</i> isolates from each farm exhibited NWT phenotypes, reflecting AMR levels, for 6 out of 14 antimicrobials tested. This included notable levels for the highest priority critically important antimicrobials (HPCIAs) ciprofloxacin (93%) and nalidixic acid (64%). A significant correlation (Spearman ρ = 0.67, <i>p</i> < 0.05) was observed between the total farm-level AMU and the number of antimicrobials for which NWT <i>E. coli</i> isolates were found. However, no significant correlation was found between AMU and AMR for the five most frequently used antimicrobials, likely due to a high baseline prevalence of NWT <i>E. coli</i> isolates and relatively few independent observations. <b>Conclusions:</b> These findings highlight the urgent need to reduce AMU in general, specifically the use of (HP)CIAs, to mitigate AMR on Indonesian broiler farms.</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"13 12","pages":""},"PeriodicalIF":4.3000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11672412/pdf/","citationCount":"0","resultStr":"{\"title\":\"Antimicrobial Usage and Antimicrobial Resistance in Commensal <i>Escherichia coli</i> from Broiler Farms: A Farm-Level Analysis in West Java, Indonesia.\",\"authors\":\"Rianna Anwar Sani, Sunandar Sunandar, Annisa Rachmawati, Gian Pertela, Oli Susanti, Kanti Puji Rahayu, Puttik Allamanda, Imron Suandy, Nofita Nurbiyanti, Elvina J Jahja, Budi Purwanto, On Behalf Of Cornerstone Group, Francisca C Velkers, Tagrid Dinar, Jaap A Wagenaar, David C Speksnijder\",\"doi\":\"10.3390/antibiotics13121181\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><b>Background/Objectives:</b> Antimicrobial resistance (AMR) is a global public health threat, with antimicrobial use (AMU) in livestock recognized as a significant driver. This study examines farm-level AMU and AMR as well as the relationship between AMU and AMR on broiler farms in Indonesia. <b>Methods:</b> Data were collected from 19 farms in West Java between 2019 and 2021 to examine AMU in depth across four to five successive production cycles. The correlation between AMU and AMR in commensal <i>Escherichia coli</i> (<i>E. coli</i>) was investigated. AMU was recorded as treatment days per 30-day production cycle, and antimicrobial susceptibility was assessed using epidemiological cut-off (ECOFF) values to differentiate wildtype (WT) and non-wildtype (NWT) <i>E. coli</i>. <b>Results:</b> The average AMU was 12 treatment days per 30-day production cycle, with a wide range of 4 to 22 days. On average, <i>E. coli</i> isolates from each farm exhibited NWT phenotypes, reflecting AMR levels, for 6 out of 14 antimicrobials tested. This included notable levels for the highest priority critically important antimicrobials (HPCIAs) ciprofloxacin (93%) and nalidixic acid (64%). A significant correlation (Spearman ρ = 0.67, <i>p</i> < 0.05) was observed between the total farm-level AMU and the number of antimicrobials for which NWT <i>E. coli</i> isolates were found. However, no significant correlation was found between AMU and AMR for the five most frequently used antimicrobials, likely due to a high baseline prevalence of NWT <i>E. coli</i> isolates and relatively few independent observations. <b>Conclusions:</b> These findings highlight the urgent need to reduce AMU in general, specifically the use of (HP)CIAs, to mitigate AMR on Indonesian broiler farms.</p>\",\"PeriodicalId\":54246,\"journal\":{\"name\":\"Antibiotics-Basel\",\"volume\":\"13 12\",\"pages\":\"\"},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2024-12-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11672412/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Antibiotics-Basel\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3390/antibiotics13121181\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"INFECTIOUS DISEASES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Antibiotics-Basel","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3390/antibiotics13121181","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

摘要

背景/目的:抗菌素耐药性(AMR)是一个全球性的公共卫生威胁,畜牧业中抗菌素使用(AMU)被认为是一个重要的驱动因素。本研究考察了印尼肉鸡养殖场的农场水平AMU和AMR以及AMU和AMR之间的关系。方法:从2019年至2021年期间从西爪哇的19个农场收集数据,在4到5个连续的生产周期内深入检查AMU。研究了共生大肠杆菌中AMU与AMR的相关性。AMU以每30天生产周期的处理天数记录,并使用流行病学截止值(ECOFF)评估抗菌药物敏感性,以区分野生型(WT)和非野生型(NWT)大肠杆菌。结果:平均AMU为每30天生产周期12天,范围为4 ~ 22天。平均而言,来自每个农场的大肠杆菌分离株在测试的14种抗菌素中有6种表现出NWT表型,反映了AMR水平。这包括最重要的抗菌药环丙沙星(93%)和萘啶酸(64%)的显著水平。养殖场总AMU与发现NWT大肠杆菌分离株的抗菌药物数量之间存在显著相关(Spearman ρ = 0.67, p < 0.05)。然而,五种最常用的抗菌素的AMU和AMR之间没有发现显著的相关性,这可能是由于NWT大肠杆菌分离株的基线流行率较高以及相对较少的独立观察结果。结论:这些发现强调了总体上减少AMU的迫切需要,特别是(HP)CIAs的使用,以减轻印度尼西亚肉鸡养殖场的AMR。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Antimicrobial Usage and Antimicrobial Resistance in Commensal Escherichia coli from Broiler Farms: A Farm-Level Analysis in West Java, Indonesia.

Background/Objectives: Antimicrobial resistance (AMR) is a global public health threat, with antimicrobial use (AMU) in livestock recognized as a significant driver. This study examines farm-level AMU and AMR as well as the relationship between AMU and AMR on broiler farms in Indonesia. Methods: Data were collected from 19 farms in West Java between 2019 and 2021 to examine AMU in depth across four to five successive production cycles. The correlation between AMU and AMR in commensal Escherichia coli (E. coli) was investigated. AMU was recorded as treatment days per 30-day production cycle, and antimicrobial susceptibility was assessed using epidemiological cut-off (ECOFF) values to differentiate wildtype (WT) and non-wildtype (NWT) E. coli. Results: The average AMU was 12 treatment days per 30-day production cycle, with a wide range of 4 to 22 days. On average, E. coli isolates from each farm exhibited NWT phenotypes, reflecting AMR levels, for 6 out of 14 antimicrobials tested. This included notable levels for the highest priority critically important antimicrobials (HPCIAs) ciprofloxacin (93%) and nalidixic acid (64%). A significant correlation (Spearman ρ = 0.67, p < 0.05) was observed between the total farm-level AMU and the number of antimicrobials for which NWT E. coli isolates were found. However, no significant correlation was found between AMU and AMR for the five most frequently used antimicrobials, likely due to a high baseline prevalence of NWT E. coli isolates and relatively few independent observations. Conclusions: These findings highlight the urgent need to reduce AMU in general, specifically the use of (HP)CIAs, to mitigate AMR on Indonesian broiler farms.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Antibiotics-Basel
Antibiotics-Basel Pharmacology, Toxicology and Pharmaceutics-General Pharmacology, Toxicology and Pharmaceutics
CiteScore
7.30
自引率
14.60%
发文量
1547
审稿时长
11 weeks
期刊介绍: Antibiotics (ISSN 2079-6382) is an open access, peer reviewed journal on all aspects of antibiotics. Antibiotics is a multi-disciplinary journal encompassing the general fields of biochemistry, chemistry, genetics, microbiology and pharmacology. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the length of papers.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信