Sporocadaceae再现。

IF 14.1 1区生物学 Q1 MYCOLOGY

Studies in Mycology Pub Date : 2024-12-01 Epub Date: 2024-06-27 DOI:10.3114/sim.2024.109.03

P Razaghi, M Raza, S L Han, Z Y Ma, L Cai, P Zhao, Q Chen, D Phurbu, F Liu

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Of these, 43 new species and three new combinations (Dis. kaki, Mon. bulbophylli, and Neo. keteleeriae) are proposed in this paper. In addition, Neo. vaccinii, Pes. kaki and Pes. nanjingensis are synonymised under Neo. hispanica, Pes. menhaiensis and Pes. sichuanensis, respectively. We also corrected seven problematic sequences of type materials of previously published species, namely Neo. iranensis (tef-1α, ITS, tub2), Pes. jesteri (tef-1α), Pes. photinicola (ITS, tub2) and Pes. yunnanensis (ITS). Based on this study, Pestalotiopsis and Neopestalotiopsis are the most commonly detected genera within the Sporocadaceae family, associated with 84 and 70 plant species, respectively. Furthermore, considering the importance of Sporocadaceae and the fact that commonly used loci provide little valid information for species delimitation in this family, especially for Neopestalotiopsis and Pestalotiopsis, we initiated a phylogenomic project in this study. It will not only contribute to the knowledge of species boundaries but will also provide an important basis for evolutionary studies and research on secondary metabolites in Sporocadaceae. Taxonomic novelties: New genus: Cavernicola P. Razaghi, F. Liu & L. Cai. New species: Cavernicola guangxiensis P. Razaghi, F. Liu & L. Cai, Discosia ascidiata P. Razaghi, F. Liu & L. Cai, Discosia jiangxiensis P. Razaghi, F. Liu & L. Cai, Discosia navicularis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis ageratinae P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis castanopsidis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis celtidis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis collariata P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis dimorphospora P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis dolichoconidiophora P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fijiensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fimbriata P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fuzhouensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis guangxiensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis guizhouensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis jiangxiensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis liquidambaris P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis machili P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis megabetaspora P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis moniliformis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis nanningensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis phyllostachydis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis poae P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis smilacis P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis alloschemones P. Razaghi, F. Liu & L. Cai, Pestalotiopsis americana P. Razaghi, F. Liu & L. Cai, Pestalotiopsis biappendiculata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis cratoxyli P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis exudata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis fusiformis P. Razaghi, F. Liu & L. Cai, Pestalotiopsis ganzhouensis P. Razaghi, F. Liu & L. Cai, Pestalotiopsis leucospermi P. Razaghi, F. Liu & L. Cai, Pestalotiopsis lobata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis machili P. Razaghi, F. Liu & L. Cai, Pestalotiopsis multiappendiculata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis pruni P. Razaghi, F. Liu & L. Cai, Pestalotiopsis rubrae P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis wulichongensis P. Razaghi, F. Liu, M. Raza & L. Cai, Seimatosporium tibetense P. Razaghi, F. Liu & L. Cai, Seiridium rhododendri P. Razaghi, F. Liu & L. Cai, Sporocadus cavernicola P. Razaghi, F. Liu & L. Cai, Sporocadus hyperici P. Razaghi, F. Liu & L. Cai, Sporocadus tibetensis P. Razaghi, F. Liu & L. Cai. New combinations: Discosia kaki (Kaz. Tanaka et al.) P. Razaghi, F. Liu & L. Cai, Monochaetia bulbophylli (S.F. Ran & Yong Wang bis) P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis keteleeriae (Y. Song et al.) P. Razaghi, F. Liu & L. Cai. Citation: Razaghi P, Raza M, Han SL, Ma ZY, Cai L, Zhao P, Chen Q, Phurbu D, Liu F (2024). Sporocadaceae revisited. Studies in Mycology 109: 155-272. doi: 10.3114/sim.2024.109.03.","PeriodicalId":22036,"journal":{"name":"Studies in Mycology","volume":"109 ","pages":"155-272"},"PeriodicalIF":14.1000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11663424/pdf/","citationCount":"0","resultStr":"{\"title\":\"Sporocadaceae revisited.\",\"authors\":\"P Razaghi, M Raza, S L Han, Z Y Ma, L Cai, P Zhao, Q Chen, D Phurbu, F Liu\",\"doi\":\"10.3114/sim.2024.109.03\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Sporocadaceae is a species-rich and cosmopolitan fungal family including species of plant pathogens, endophytes or saprobes, and parasites of humans and animals. 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We also corrected seven problematic sequences of type materials of previously published species, namely Neo. iranensis (tef-1α, ITS, tub2), Pes. jesteri (tef-1α), Pes. photinicola (ITS, tub2) and Pes. yunnanensis (ITS). Based on this study, Pestalotiopsis and Neopestalotiopsis are the most commonly detected genera within the Sporocadaceae family, associated with 84 and 70 plant species, respectively. Furthermore, considering the importance of Sporocadaceae and the fact that commonly used loci provide little valid information for species delimitation in this family, especially for Neopestalotiopsis and Pestalotiopsis, we initiated a phylogenomic project in this study. It will not only contribute to the knowledge of species boundaries but will also provide an important basis for evolutionary studies and research on secondary metabolites in Sporocadaceae. Taxonomic novelties: New genus: Cavernicola P. Razaghi, F. Liu & L. Cai. New species: Cavernicola guangxiensis P. Razaghi, F. Liu & L. Cai, Discosia ascidiata P. Razaghi, F. Liu & L. Cai, Discosia jiangxiensis P. Razaghi, F. Liu & L. Cai, Discosia navicularis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis ageratinae P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis castanopsidis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis celtidis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis collariata P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis dimorphospora P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis dolichoconidiophora P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fijiensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fimbriata P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fuzhouensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis guangxiensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis guizhouensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis jiangxiensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis liquidambaris P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis machili P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis megabetaspora P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis moniliformis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis nanningensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis phyllostachydis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis poae P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis smilacis P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis alloschemones P. Razaghi, F. Liu & L. Cai, Pestalotiopsis americana P. Razaghi, F. Liu & L. Cai, Pestalotiopsis biappendiculata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis cratoxyli P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis exudata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis fusiformis P. Razaghi, F. Liu & L. Cai, Pestalotiopsis ganzhouensis P. Razaghi, F. Liu & L. Cai, Pestalotiopsis leucospermi P. Razaghi, F. Liu & L. Cai, Pestalotiopsis lobata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis machili P. Razaghi, F. Liu & L. Cai, Pestalotiopsis multiappendiculata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis pruni P. Razaghi, F. Liu & L. Cai, Pestalotiopsis rubrae P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis wulichongensis P. Razaghi, F. Liu, M. Raza & L. Cai, Seimatosporium tibetense P. Razaghi, F. Liu & L. Cai, Seiridium rhododendri P. Razaghi, F. Liu & L. Cai, Sporocadus cavernicola P. Razaghi, F. Liu & L. Cai, Sporocadus hyperici P. Razaghi, F. Liu & L. Cai, Sporocadus tibetensis P. Razaghi, F. Liu & L. Cai. New combinations: Discosia kaki (Kaz. Tanaka et al.) P. Razaghi, F. Liu & L. Cai, Monochaetia bulbophylli (S.F. Ran & Yong Wang bis) P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis keteleeriae (Y. Song et al.) P. Razaghi, F. Liu & L. Cai. Citation: Razaghi P, Raza M, Han SL, Ma ZY, Cai L, Zhao P, Chen Q, Phurbu D, Liu F (2024). Sporocadaceae revisited. 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引用次数: 0

摘要

孢子菌科是一个种类丰富、分布广泛的真菌科，包括植物病原菌、内生菌或腐生菌以及人类和动物的寄生虫。孢子菌科的分类学最近用多相方法进行了修订。然而，关于物种的多样性和它们的宿主关联，还有很多未知之处。通过形态学比较和多位点（LSU、ITS、tef-1α、tub2和rpb2）系统发育分析，对来自中国、与129种寄主植物相关的488株菌株进行了研究。结果表明，它们分属86种，新属1个，已知属7个，包括Discosia、Monochaetia、Neopestalotiopsis、Pestalotiopsis、Seimatosporium、Seiridium和Sporocadus。其中，有43个新种和3个新组合（diss . kaki, Mon. bulbophylli，和Neo. kaki）。本文提出了油杉属植物（Keteleeriae）。此外，Neo。vaccinii, Pes。卡其和佩斯。nanjingensis是Neo的同义词。hispanica, Pes。menhaiensis和Pes。分别sichuanensis。我们还纠正了先前发表的物种（即Neo）的7个有问题的类型材料序列。iranensis (tef-1α， ITS, tub2), Pes。jesteri (tef-1α)；photinicola （ITS, tub2）和Pes。云南裂(它)。本研究发现拟盘多毛孢属和新盘多毛孢属是Sporocadaceae科中最常见的属，分别与84种和70种植物有关。此外，考虑到Sporocadaceae的重要性以及常用位点对该科物种划分的有效信息很少，特别是对于新拟盘多毛孢和拟盘多毛孢，我们在本研究中启动了系统基因组项目。这不仅有助于了解孢子菌科的物种边界，而且为孢子菌科次生代谢产物的进化研究和研究提供了重要依据。分类学新颖性：新属：巨穴藻（Cavernicola P. Razaghi），刘云峰，蔡丽玲。新物种:Cavernicola guangxiensis p . Razaghi f·刘& l . Cai Discosia ascidiata p . Razaghi f·刘& l . Cai Discosia jiangxiensis p . Razaghi f·刘& l . Cai Discosia navicularis p . Razaghi f·刘& l . Cai Neopestalotiopsis ageratinae p . Razaghi f·刘& l . Cai Neopestalotiopsis castanopsidis p . Razaghi f·刘& l . Cai Neopestalotiopsis celtidis p . Razaghi f . Liu m . Raza & l . Cai Neopestalotiopsis collariata p . Razaghi f·刘& l . Cai Neopestalotiopsis dimorphospora p . Razaghif·刘& l . Cai Neopestalotiopsis dolichoconidiophora p . Razaghi f·刘& l . Cai Neopestalotiopsis fijiensis p . Razaghi f·刘& l . Cai Neopestalotiopsis fimbriata p . Razaghi f·刘& l . Cai Neopestalotiopsis fuzhouensis p . Razaghi f·刘& l . Cai Neopestalotiopsis guangxiensis p . Razaghi f . Liu m . Raza & l . Cai Neopestalotiopsis guizhouensis p . Razaghi f . Liu m . Raza & l . Cai Neopestalotiopsis jiangxiensis p . Razaghi f·刘& l . Cai Neopestalotiopsis liquidambaris p . Razaghif·刘& l . Cai Neopestalotiopsis machili p . Razaghi f·刘& l . Cai Neopestalotiopsis megabetaspora p . Razaghi f . Liu m . Raza & l . Cai Neopestalotiopsis念珠p . Razaghi f·刘& l . Cai Neopestalotiopsis nanningensis p . Razaghi f . Liu m . Raza & l . Cai Neopestalotiopsis phyllostachydis p . Razaghi f . Liu m . Raza & l . Cai Neopestalotiopsis poae p . Razaghi f·刘& l . Cai Neopestalotiopsis smilacis p . Razaghi f . Liu m . Raza & l .蔡Pestalotiopsis alloschemones p . Razaghi f·刘& l . Cai Pestalotiopsis美国p . Razaghi f·刘& l . Cai Pestalotiopsis biappendiculata p . Razaghi f·刘& l . Cai Pestalotiopsis cratoxyli p . Razaghi f . Liu m . Raza & l . Cai Pestalotiopsis exudata p . Razaghi f·刘& l . Cai Pestalotiopsis梭杆菌属p . Razaghi f·刘& l . Cai Pestalotiopsis ganzhouensis p . Razaghi f·刘& l . Cai Pestalotiopsis leucospermi p . Razaghi f·刘& l . Cai Pestalotiopsis兜水母目p . Razaghif·刘& l . Cai Pestalotiopsis machili p . Razaghi f·刘& l . Cai Pestalotiopsis multiappendiculata p . Razaghi f·刘& l . Cai Pestalotiopsis pruni p . Razaghi f·刘& l . Cai Pestalotiopsis rubrae p . Razaghi f . Liu m . Raza & l . Cai Pestalotiopsis wulichongensis p . Razaghi f . Liu m . Raza & l . Cai Seimatosporium tibetense p . Razaghi f·刘& l . Cai Seiridium rhododendri p . Razaghi f·刘& l . Cai Sporocadus cavernicola p . Razaghi f·刘& l . Cai Sporocadus hyperici p . RazaghiP. Razaghi, Liu F. & Cai L.。新组合：disco kaki（和子）P. Razaghi， F. Liu & L. Cai, Monochaetia bulbophylli (S.F. Ran & Yong Wang bis) P. Razaghi， F. Liu & L. Cai, Neopestalotiopsis keteleeriae (Y. Song et .) P. Razaghi， F. Liu & L. Cai。引用本文：Razaghi P， Raza M, Han SL, Ma ZY，蔡玲，赵平，陈强，Phurbu D，刘峰（2024）。Sporocadaceae再现。真菌学研究109:155-272。doi: 10.3114 / sim.2024.109.03。

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Sporocadaceae revisited.

Sporocadaceae is a species-rich and cosmopolitan fungal family including species of plant pathogens, endophytes or saprobes, and parasites of humans and animals. The taxonomy of Sporocadaceae has recently been revised using a polyphasic approach. However, much remains unknown about the diversity of species and their host associations. A collection of 488 strains, mostly from China and associated with 129 host plant species, was studied based on morphological comparisons and multi-locus (LSU, ITS, tef-1α, tub2, and rpb2) phylogenies. Our results revealed that they belonged to 86 species, one new genus (Cavernicola gen. nov.) and seven known genera, including Discosia, Monochaetia, Neopestalotiopsis, Pestalotiopsis, Seimatosporium, Seiridium and Sporocadus. Of these, 43 new species and three new combinations (Dis. kaki, Mon. bulbophylli, and Neo. keteleeriae) are proposed in this paper. In addition, Neo. vaccinii, Pes. kaki and Pes. nanjingensis are synonymised under Neo. hispanica, Pes. menhaiensis and Pes. sichuanensis, respectively. We also corrected seven problematic sequences of type materials of previously published species, namely Neo. iranensis (tef-1α, ITS, tub2), Pes. jesteri (tef-1α), Pes. photinicola (ITS, tub2) and Pes. yunnanensis (ITS). Based on this study, Pestalotiopsis and Neopestalotiopsis are the most commonly detected genera within the Sporocadaceae family, associated with 84 and 70 plant species, respectively. Furthermore, considering the importance of Sporocadaceae and the fact that commonly used loci provide little valid information for species delimitation in this family, especially for Neopestalotiopsis and Pestalotiopsis, we initiated a phylogenomic project in this study. It will not only contribute to the knowledge of species boundaries but will also provide an important basis for evolutionary studies and research on secondary metabolites in Sporocadaceae. Taxonomic novelties: New genus: Cavernicola P. Razaghi, F. Liu & L. Cai. New species: Cavernicola guangxiensis P. Razaghi, F. Liu & L. Cai, Discosia ascidiata P. Razaghi, F. Liu & L. Cai, Discosia jiangxiensis P. Razaghi, F. Liu & L. Cai, Discosia navicularis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis ageratinae P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis castanopsidis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis celtidis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis collariata P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis dimorphospora P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis dolichoconidiophora P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fijiensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fimbriata P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis fuzhouensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis guangxiensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis guizhouensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis jiangxiensis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis liquidambaris P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis machili P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis megabetaspora P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis moniliformis P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis nanningensis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis phyllostachydis P. Razaghi, F. Liu, M. Raza & L. Cai, Neopestalotiopsis poae P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis smilacis P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis alloschemones P. Razaghi, F. Liu & L. Cai, Pestalotiopsis americana P. Razaghi, F. Liu & L. Cai, Pestalotiopsis biappendiculata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis cratoxyli P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis exudata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis fusiformis P. Razaghi, F. Liu & L. Cai, Pestalotiopsis ganzhouensis P. Razaghi, F. Liu & L. Cai, Pestalotiopsis leucospermi P. Razaghi, F. Liu & L. Cai, Pestalotiopsis lobata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis machili P. Razaghi, F. Liu & L. Cai, Pestalotiopsis multiappendiculata P. Razaghi, F. Liu & L. Cai, Pestalotiopsis pruni P. Razaghi, F. Liu & L. Cai, Pestalotiopsis rubrae P. Razaghi, F. Liu, M. Raza & L. Cai, Pestalotiopsis wulichongensis P. Razaghi, F. Liu, M. Raza & L. Cai, Seimatosporium tibetense P. Razaghi, F. Liu & L. Cai, Seiridium rhododendri P. Razaghi, F. Liu & L. Cai, Sporocadus cavernicola P. Razaghi, F. Liu & L. Cai, Sporocadus hyperici P. Razaghi, F. Liu & L. Cai, Sporocadus tibetensis P. Razaghi, F. Liu & L. Cai. New combinations: Discosia kaki (Kaz. Tanaka et al.) P. Razaghi, F. Liu & L. Cai, Monochaetia bulbophylli (S.F. Ran & Yong Wang bis) P. Razaghi, F. Liu & L. Cai, Neopestalotiopsis keteleeriae (Y. Song et al.) P. Razaghi, F. Liu & L. Cai. Citation: Razaghi P, Raza M, Han SL, Ma ZY, Cai L, Zhao P, Chen Q, Phurbu D, Liu F (2024). Sporocadaceae revisited. Studies in Mycology 109: 155-272. doi: 10.3114/sim.2024.109.03.

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来源期刊

Studies in Mycology 生物-真菌学

CiteScore

35.60

自引率

3.00%

发文量

期刊介绍： The international journal Studies in Mycology focuses on advancing the understanding of filamentous fungi, yeasts, and various aspects of mycology. It publishes comprehensive systematic monographs as well as topical issues covering a wide range of subjects including biotechnology, ecology, molecular biology, pathology, and systematics. This Open-Access journal offers unrestricted access to its content. Each issue of Studies in Mycology consists of around 5 to 6 papers, either in the form of monographs or special focused topics. Unlike traditional length restrictions, the journal encourages submissions of manuscripts with a minimum of 50 A4 pages in print. This ensures a thorough exploration and presentation of the research findings, maximizing the depth of the published work.