马尾狭口鼠线粒体全基因组序列及其与贝克福特狭口鼠的比较分析。

IF 2.3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xian-Ru Li, Cheng-He Sun, Yi-Jing Zhan, Shuang-Xi Jia, Chang-Hu Lu
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引用次数: 0

摘要

棕色铅笔鱼,Nannostomus eques是一种用于观赏目的的lebiasinid;然而,其完整的线粒体基因组序列仍然未知。为了丰富纳米stomus的分子遗传信息,我们首次报道了Nannostomus eques线粒体全基因组序列,并将其与beckfordi纳米stomus进行了比较。eques和N. beckfordi线粒体基因组的总长度分别为16673 bp和16742 bp,在两者的整个结构中都存在一个由重链和轻链组成的双链环。我们使用PhyloSuite v1.2.1基于tRNAs、rnas和蛋白编码基因(PCGs)数据构建最大似然树和贝叶斯分析树,并参考其他研究与其他Nannostomus物种进行比较。我们的研究发现,N. beckfordi与N. eques的亲缘关系比与同科的Lebiasina astrigata的亲缘关系更近,并且我们在Nannostomus物种中发现了一些相似之处甚至规律。本研究为纳米气孔属植物的保护和可持续利用提供了分子基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Complete mitochondrial genome sequence of Nannostomus eques and comparative analysis with Nannostomus beckfordi.

The brown pencilfish, Nannostomus eques is a lebiasinid harvested for ornamental purposes; however, its complete mitochondrial genome sequence is still unknown. To enrich the molecular genetic information pertaining to Nannostomus, we present here the first report of the complete mitochondrial genome sequence of Nannostomus eques and compare it with Nannostomus beckfordi. The total lengths of the N. eques and N. beckfordi mitochondrial genomes were 16,673 bp and 16,742 bp, respectively, and there was a double-stranded ring with a heavy chain and a light chain in the whole structures of both. We used PhyloSuite v1.2.1 to construct the maximum likelihood and Bayesian Analysis trees based on tRNAs, rRNAs, and protein-coding genes (PCGs) data and compared them with other Nannostomus species by referring to other studies. Our study found that N. beckfordi has a closer genetic relationship with N. eques than with Lebiasina astrigata, which belongs to the same family, and we discovered some similarities and even rules in Nannostomus species. Our study provides a molecular basis for the conservation and sustainable use of Nannostomus species.

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来源期刊
Molecular Genetics and Genomics
Molecular Genetics and Genomics 生物-生化与分子生物学
CiteScore
5.10
自引率
3.20%
发文量
134
审稿时长
1 months
期刊介绍: Molecular Genetics and Genomics (MGG) publishes peer-reviewed articles covering all areas of genetics and genomics. Any approach to the study of genes and genomes is considered, be it experimental, theoretical or synthetic. MGG publishes research on all organisms that is of broad interest to those working in the fields of genetics, genomics, biology, medicine and biotechnology. The journal investigates a broad range of topics, including these from recent issues: mechanisms for extending longevity in a variety of organisms; screening of yeast metal homeostasis genes involved in mitochondrial functions; molecular mapping of cultivar-specific avirulence genes in the rice blast fungus and more.
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