exsudans青霉分离株RCEF7900新型zetapatitivirus的鉴定和全基因组序列分析

IF 2.5 4区 医学 Q3 VIROLOGY
Yanjie Zhao, Ping Wang, Lili He, Guogen Yang, Bo Huang
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引用次数: 0

摘要

从凋落叶中分离得到的外延青霉菌株RCEF7900含有两个双链RNA (dsRNA)元件,分别为dsRNA1和dsRNA2,长度分别为1816 bp和1625 bp。dsRNA1编码572个氨基酸的RNA依赖RNA聚合酶(RdRp)蛋白(65.29 kDa),而dsRNA2编码503个氨基酸的外壳蛋白(CP) (56.73 kDa)。BLASTp检索结果表明,dsRNA1和dsrna2共同构成了一种新型局部病毒的基因组,我们将其命名为“Penicillium exsudans partitivirus 1”(PePV1)。基于RdRp氨基酸序列的系统发育分析表明,这些基因组片段属于分病毒科“Zetapatitivirus”属的一个新种成员,RdRp与Sonifin病毒的序列相似性最高(同源性为79.72%)。这是首次报道来自埃及假单胞菌的zetapatitivirus,扩大了我们对该真菌物种中分枝病毒多样性的认识。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Characterization and complete genome sequence of a novel zetapatitivirus from Penicillium exsudans isolate RCEF7900

Penicillium exsudans strain RCEF7900, obtained from leaf litter, was found to harbor two double-stranded RNA (dsRNA) elements, designated as dsRNA1 and dsRNA2, with lengths of 1,816 bp and 1,625 bp, respectively. dsRNA1 encodes a 572-amino-acid RNA-dependent RNA polymerase (RdRp) protein (65.29 kDa), while dsRNA2 encodes a 503-amino-acid coat protein (CP) (56.73 kDa). A BLASTp search indicated that dsRNA1 and dsRNA 2 together constitute the genome of a novel partitivirus, which we have named "Penicillium exsudans partitivirus 1" (PePV1). Phylogenetic analysis based on RdRp amino acid sequences revealed that these genome segments belong to a member of a new species within the proposed genus “Zetapatitivirus” of the family Partitiviridae, with the RdRp showing the most sequence similarity (79.72% identity) to that of Sonifin virus. This is the first report of a zetapatitivirus from P. exsudans, expanding our understanding of mycoviral diversity in this fungal species.

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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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