Jacob A. Gorneau , Franklyn Cala-Riquelme , Sarah C. Crews , Katherine O. Montana , Joseph C. Spagna , Cor J. Vink , Lauren A. Esposito
{"title":"赏金之谜:1904年(Araneae) Pacificana cockayni Hogg的家庭地位。","authors":"Jacob A. Gorneau , Franklyn Cala-Riquelme , Sarah C. Crews , Katherine O. Montana , Joseph C. Spagna , Cor J. Vink , Lauren A. Esposito","doi":"10.1016/j.ympev.2024.108256","DOIUrl":null,"url":null,"abstract":"<div><div>The family-level placement of the species <em>Pacificana cockayni</em> <span><span>Hogg, 1904</span></span> (Araneae, Miturgidae) has been ambiguous for over a century, with the monotypic genus <em>Pacificana</em> initially placed in Agelenidae, later transferred to Amaurobioidinae (Anyphaenidae), and presently in Miturgidae. A recent work describing the male and molecular data consisting of a single mitochondrial gene, cytochrome <em>c</em> oxidase subunit I, confirmed that the species is part of the marronoid clade; however, these data did not result in a conclusive family-level placement. Here, we use low-coverage whole genome sequencing (lcWGS) combined with data from the Sequence Read Archive to infer a phylogeny from ultraconserved elements (UCEs) and six legacy Sanger loci. Indications of potential family placements from prior work and the topologies from this study support a transfer of <em>Pacificana</em> Hogg, 1904 to Cycloctenidae Simon, 1898 (<strong>new family placement</strong>).</div></div>","PeriodicalId":56109,"journal":{"name":"Molecular Phylogenetics and Evolution","volume":"204 ","pages":"Article 108256"},"PeriodicalIF":3.6000,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Mystery on the Bounty: The family-level status of Pacificana cockayni Hogg, 1904 (Araneae)\",\"authors\":\"Jacob A. Gorneau , Franklyn Cala-Riquelme , Sarah C. Crews , Katherine O. Montana , Joseph C. Spagna , Cor J. Vink , Lauren A. Esposito\",\"doi\":\"10.1016/j.ympev.2024.108256\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The family-level placement of the species <em>Pacificana cockayni</em> <span><span>Hogg, 1904</span></span> (Araneae, Miturgidae) has been ambiguous for over a century, with the monotypic genus <em>Pacificana</em> initially placed in Agelenidae, later transferred to Amaurobioidinae (Anyphaenidae), and presently in Miturgidae. A recent work describing the male and molecular data consisting of a single mitochondrial gene, cytochrome <em>c</em> oxidase subunit I, confirmed that the species is part of the marronoid clade; however, these data did not result in a conclusive family-level placement. Here, we use low-coverage whole genome sequencing (lcWGS) combined with data from the Sequence Read Archive to infer a phylogeny from ultraconserved elements (UCEs) and six legacy Sanger loci. Indications of potential family placements from prior work and the topologies from this study support a transfer of <em>Pacificana</em> Hogg, 1904 to Cycloctenidae Simon, 1898 (<strong>new family placement</strong>).</div></div>\",\"PeriodicalId\":56109,\"journal\":{\"name\":\"Molecular Phylogenetics and Evolution\",\"volume\":\"204 \",\"pages\":\"Article 108256\"},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2024-12-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Molecular Phylogenetics and Evolution\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1055790324002483\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular Phylogenetics and Evolution","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1055790324002483","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Mystery on the Bounty: The family-level status of Pacificana cockayni Hogg, 1904 (Araneae)
The family-level placement of the species Pacificana cockayniHogg, 1904 (Araneae, Miturgidae) has been ambiguous for over a century, with the monotypic genus Pacificana initially placed in Agelenidae, later transferred to Amaurobioidinae (Anyphaenidae), and presently in Miturgidae. A recent work describing the male and molecular data consisting of a single mitochondrial gene, cytochrome c oxidase subunit I, confirmed that the species is part of the marronoid clade; however, these data did not result in a conclusive family-level placement. Here, we use low-coverage whole genome sequencing (lcWGS) combined with data from the Sequence Read Archive to infer a phylogeny from ultraconserved elements (UCEs) and six legacy Sanger loci. Indications of potential family placements from prior work and the topologies from this study support a transfer of Pacificana Hogg, 1904 to Cycloctenidae Simon, 1898 (new family placement).
期刊介绍:
Molecular Phylogenetics and Evolution is dedicated to bringing Darwin''s dream within grasp - to "have fairly true genealogical trees of each great kingdom of Nature." The journal provides a forum for molecular studies that advance our understanding of phylogeny and evolution, further the development of phylogenetically more accurate taxonomic classifications, and ultimately bring a unified classification for all the ramifying lines of life. Phylogeographic studies will be considered for publication if they offer EXCEPTIONAL theoretical or empirical advances.