基于基因组的 Halobellus rubicundus sp.

IF 2.6 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Chi Young Hwang, Eui-Sang Cho, In-Tae Cha, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
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引用次数: 0

摘要

从大韩民国新罗的一个日晒盐场中分离出了一种新的极嗜卤古菌,命名为 MBLA0158T。菌落呈红色色素沉着、革兰氏染色阴性、多形性、非运动性,可在蒸馏水中溶解。该菌株的生长温度为 25-45℃(最适温度为 37℃),生长条件为 15-30%(w/v)NaCl(最适浓度为 20%)和 0.1-1.0 M Mg2+(最适浓度为 0.2-0.3 M),pH 值为 6.0-10.0(最适浓度为 7.0-8.0)。基于 16S rRNA 基因序列的比较分析表明,该菌株与 Halobellus inordinatus YC20T 的亲缘关系最密切,序列同一性为 96.0%。菌株 MBLA0158T 的主要极性脂质为磷脂酰甘油和磷脂酰甘油磷酸甲酯。基因组大小为 3.29 Mb,DNA G + C 含量为 66.9 mol%。系统发生组分析证实,菌株 MBLA0158T 与之前报道的 Halobellus 属模式菌株不同。泛基因组分析表明,MBLA0158T 菌株含有 419 个卤虫属其他类型菌株所没有的基因。根据总体分析,认为菌株 MBLA0158T 代表了卤虫属的一个新种,并将其命名为 Halobellus rubicundus sp.模式菌株为 MBLA0158T(= KCTC 4318T = JCM 36642T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genome-based classification of Halobellus rubicundus sp. nov., a novel extremely halophilic archaeon isolated from a Korean solar saltern.

A novel extremely halophilic archaeon designated, MBLA0158T, was isolated from a solar saltern in Sorae, Republic of Korea. The colonies are red-pigmented, Gram-stain-negative, pleomorphic, non-motile, and lysed in distilled water. The strain grows at 25-45 °C (optimum, 37 °C), in 15-30% (w/v) NaCl (optimum, 20%) and 0.1-1.0 M Mg2+ (optimum, 0.2-0.3 M) at pH 6.0-10.0 (optimum, 7.0-8.0). Comparative analysis based on the 16S rRNA gene sequence revealed that this strain is most closely related to the Halobellus inordinatus YC20T with a sequence identity of 96.0%. Strain MBLA0158T contained phosphatidylglycerol and phosphatidylglycerol phosphate methyl ester as major polar lipids. The genome size is 3.29 Mb and the DNA G + C content is 66.9 mol%. Phylogenomic analysis confirmed that strain MBLA0158T is distinct from previously reported type strains of the genus Halobellus. Pan-genome analysis showed that strain MBLA0158T contains 419 genes that are not present in other type strains of the genus Halobellus. Based on overall analyses, strain MBLA0158T is considered to represent a new species of the genus Halobellus, for which the name Halobellus rubicundus sp. nov. is proposed. The type strain is MBLA0158T (= KCTC 4318T = JCM 36642T).

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来源期刊
Extremophiles
Extremophiles 生物-生化与分子生物学
CiteScore
6.80
自引率
6.90%
发文量
28
审稿时长
2 months
期刊介绍: Extremophiles features original research articles, reviews, and method papers on the biology, molecular biology, structure, function, and applications of microbial life at high or low temperature, pressure, acidity, alkalinity, salinity, or desiccation; or in the presence of organic solvents, heavy metals, normally toxic substances, or radiation.
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