利用眼底图像改进青光眼筛查的通用计算机视觉模型。

IF 2.8 3区 医学 Q1 OPHTHALMOLOGY
Eye Pub Date : 2024-11-05 DOI:10.1038/s41433-024-03388-4
Abadh K Chaurasia, Guei-Sheung Liu, Connor J Greatbatch, Puya Gharahkhani, Jamie E Craig, David A Mackey, Stuart MacGregor, Alex W Hewitt
{"title":"利用眼底图像改进青光眼筛查的通用计算机视觉模型。","authors":"Abadh K Chaurasia, Guei-Sheung Liu, Connor J Greatbatch, Puya Gharahkhani, Jamie E Craig, David A Mackey, Stuart MacGregor, Alex W Hewitt","doi":"10.1038/s41433-024-03388-4","DOIUrl":null,"url":null,"abstract":"<p><strong>Importance: </strong>Worldwide, glaucoma is a leading cause of irreversible blindness. Timely detection is paramount yet challenging, particularly in resource-limited settings. A novel, computer vision-based model for glaucoma screening using fundus images could enhance early and accurate disease detection.</p><p><strong>Objective: </strong>To develop and validate a generalised deep-learning-based algorithm for screening glaucoma using fundus image.</p><p><strong>Design, setting and participants: </strong>The glaucomatous fundus data were collected from 20 publicly accessible databases worldwide, resulting in 18,468 images from multiple clinical settings, of which 10,900 were classified as healthy and 7568 as glaucoma. All the data were evaluated and downsized to fit the model's input requirements. The potential model was selected from 20 pre-trained models and trained on the whole dataset except Drishti-GS. The best-performing model was further trained to classify healthy and glaucomatous fundus images using Fastai and PyTorch libraries.</p><p><strong>Main outcomes and measures: </strong>The model's performance was compared against the actual class using the area under the receiver operating characteristic (AUROC), sensitivity, specificity, accuracy, precision and the F1-score.</p><p><strong>Results: </strong>The high discriminative ability of the best-performing model was evaluated on a dataset comprising 1364 glaucomatous discs and 2047 healthy discs. The model reflected robust performance metrics, with an AUROC of 0.9920 (95% CI: 0.9920-0.9921) for both the glaucoma and healthy classes. The sensitivity, specificity, accuracy, precision, recall and F1-scores were consistently higher than 0.9530 for both classes. The model performed well on an external validation set of the Drishti-GS dataset, with an AUROC of 0.8751 and an accuracy of 0.8713.</p><p><strong>Conclusions and relevance: </strong>This study demonstrated the high efficacy of our classification model in distinguishing between glaucomatous and healthy discs. However, the model's accuracy slightly dropped when evaluated on unseen data, indicating potential inconsistencies among the datasets-the model needs to be refined and validated on larger, more diverse datasets to ensure reliability and generalisability. Despite this, our model can be utilised for screening glaucoma at the population level.</p>","PeriodicalId":12125,"journal":{"name":"Eye","volume":" ","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2024-11-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A generalised computer vision model for improved glaucoma screening using fundus images.\",\"authors\":\"Abadh K Chaurasia, Guei-Sheung Liu, Connor J Greatbatch, Puya Gharahkhani, Jamie E Craig, David A Mackey, Stuart MacGregor, Alex W Hewitt\",\"doi\":\"10.1038/s41433-024-03388-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Importance: </strong>Worldwide, glaucoma is a leading cause of irreversible blindness. Timely detection is paramount yet challenging, particularly in resource-limited settings. A novel, computer vision-based model for glaucoma screening using fundus images could enhance early and accurate disease detection.</p><p><strong>Objective: </strong>To develop and validate a generalised deep-learning-based algorithm for screening glaucoma using fundus image.</p><p><strong>Design, setting and participants: </strong>The glaucomatous fundus data were collected from 20 publicly accessible databases worldwide, resulting in 18,468 images from multiple clinical settings, of which 10,900 were classified as healthy and 7568 as glaucoma. All the data were evaluated and downsized to fit the model's input requirements. The potential model was selected from 20 pre-trained models and trained on the whole dataset except Drishti-GS. The best-performing model was further trained to classify healthy and glaucomatous fundus images using Fastai and PyTorch libraries.</p><p><strong>Main outcomes and measures: </strong>The model's performance was compared against the actual class using the area under the receiver operating characteristic (AUROC), sensitivity, specificity, accuracy, precision and the F1-score.</p><p><strong>Results: </strong>The high discriminative ability of the best-performing model was evaluated on a dataset comprising 1364 glaucomatous discs and 2047 healthy discs. The model reflected robust performance metrics, with an AUROC of 0.9920 (95% CI: 0.9920-0.9921) for both the glaucoma and healthy classes. The sensitivity, specificity, accuracy, precision, recall and F1-scores were consistently higher than 0.9530 for both classes. The model performed well on an external validation set of the Drishti-GS dataset, with an AUROC of 0.8751 and an accuracy of 0.8713.</p><p><strong>Conclusions and relevance: </strong>This study demonstrated the high efficacy of our classification model in distinguishing between glaucomatous and healthy discs. However, the model's accuracy slightly dropped when evaluated on unseen data, indicating potential inconsistencies among the datasets-the model needs to be refined and validated on larger, more diverse datasets to ensure reliability and generalisability. Despite this, our model can be utilised for screening glaucoma at the population level.</p>\",\"PeriodicalId\":12125,\"journal\":{\"name\":\"Eye\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2024-11-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Eye\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1038/s41433-024-03388-4\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"OPHTHALMOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Eye","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1038/s41433-024-03388-4","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"OPHTHALMOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

重要意义在全球范围内,青光眼是导致不可逆转性失明的主要原因。及时发现青光眼至关重要,但却极具挑战性,尤其是在资源有限的环境中。基于计算机视觉的新型青光眼筛查模型可利用眼底图像提高疾病的早期准确检测率:开发并验证基于深度学习的通用算法,利用眼底图像筛查青光眼:青光眼眼底数据收集自全球 20 个可公开访问的数据库,共获得 18,468 张来自多种临床环境的图像,其中 10,900 张被归类为健康图像,7568 张被归类为青光眼图像。所有数据都经过评估和缩减,以符合模型的输入要求。利用 Fastai 和 PyTorch 库,对表现最佳的模型进行进一步训练,以对健康和青光眼眼底图像进行分类:使用接收者操作特征下面积(AUROC)、灵敏度、特异性、准确度、精确度和 F1 分数对模型的性能与实际类别进行比较:在由 1364 个青光眼椎间盘和 2047 个健康椎间盘组成的数据集上评估了表现最佳模型的高分辨能力。该模型反映了强大的性能指标,青光眼和健康类的AUROC均为0.9920(95% CI:0.9920-0.9921)。两个类别的灵敏度、特异度、准确度、精确度、召回率和 F1 分数均高于 0.9530。该模型在 DrishtiGS 数据集的外部验证集上表现良好,AUROC 为 0.8751,准确率为 0.8713:本研究证明了我们的分类模型在区分青光眼和健康椎间盘方面的高效性。然而,在对未见数据进行评估时,模型的准确性略有下降,这表明数据集之间可能存在不一致--模型需要在更大、更多样化的数据集上进行改进和验证,以确保可靠性和通用性。尽管如此,我们的模型仍可用于人群青光眼筛查。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A generalised computer vision model for improved glaucoma screening using fundus images.

Importance: Worldwide, glaucoma is a leading cause of irreversible blindness. Timely detection is paramount yet challenging, particularly in resource-limited settings. A novel, computer vision-based model for glaucoma screening using fundus images could enhance early and accurate disease detection.

Objective: To develop and validate a generalised deep-learning-based algorithm for screening glaucoma using fundus image.

Design, setting and participants: The glaucomatous fundus data were collected from 20 publicly accessible databases worldwide, resulting in 18,468 images from multiple clinical settings, of which 10,900 were classified as healthy and 7568 as glaucoma. All the data were evaluated and downsized to fit the model's input requirements. The potential model was selected from 20 pre-trained models and trained on the whole dataset except Drishti-GS. The best-performing model was further trained to classify healthy and glaucomatous fundus images using Fastai and PyTorch libraries.

Main outcomes and measures: The model's performance was compared against the actual class using the area under the receiver operating characteristic (AUROC), sensitivity, specificity, accuracy, precision and the F1-score.

Results: The high discriminative ability of the best-performing model was evaluated on a dataset comprising 1364 glaucomatous discs and 2047 healthy discs. The model reflected robust performance metrics, with an AUROC of 0.9920 (95% CI: 0.9920-0.9921) for both the glaucoma and healthy classes. The sensitivity, specificity, accuracy, precision, recall and F1-scores were consistently higher than 0.9530 for both classes. The model performed well on an external validation set of the Drishti-GS dataset, with an AUROC of 0.8751 and an accuracy of 0.8713.

Conclusions and relevance: This study demonstrated the high efficacy of our classification model in distinguishing between glaucomatous and healthy discs. However, the model's accuracy slightly dropped when evaluated on unseen data, indicating potential inconsistencies among the datasets-the model needs to be refined and validated on larger, more diverse datasets to ensure reliability and generalisability. Despite this, our model can be utilised for screening glaucoma at the population level.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Eye
Eye 医学-眼科学
CiteScore
6.40
自引率
5.10%
发文量
481
审稿时长
3-6 weeks
期刊介绍: Eye seeks to provide the international practising ophthalmologist with high quality articles, of academic rigour, on the latest global clinical and laboratory based research. Its core aim is to advance the science and practice of ophthalmology with the latest clinical- and scientific-based research. Whilst principally aimed at the practising clinician, the journal contains material of interest to a wider readership including optometrists, orthoptists, other health care professionals and research workers in all aspects of the field of visual science worldwide. Eye is the official journal of The Royal College of Ophthalmologists. Eye encourages the submission of original articles covering all aspects of ophthalmology including: external eye disease; oculo-plastic surgery; orbital and lacrimal disease; ocular surface and corneal disorders; paediatric ophthalmology and strabismus; glaucoma; medical and surgical retina; neuro-ophthalmology; cataract and refractive surgery; ocular oncology; ophthalmic pathology; ophthalmic genetics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信