整合标本馆标本和图像数据集,处理新热带桃金娘物种群。

IF 3.6 2区 生物学 Q1 PLANT SCIENCES
Paulo Henrique Gaem, Giovani Carlos Andrella, Olivier Maurin, Volker Bittrich, Fiorella Fernanda Mazine, Eve Lucas, Maria do Carmo Estanislau do Amaral
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引用次数: 0

摘要

背景和目的:标本馆是植物分类工作最重要的信息来源。当今可用的资源和技术,如数字化收藏和标本馆 DNA 测序,可帮助加快具有挑战性的植物类群的分类决策。在这里,我们采用了一种完全依赖标本馆标本的综合方法,来研究新热带Myrcia neoobscura复合体(桃金娘科)的物种界限:方法:我们从标本馆标本的高分辨率图像中收集形态计量数据,并使用分层聚类方法进行分析。我们使用 Angiosperms353 探针试剂盒对获得的形态组进行了系统发生组学后验。我们还从标本标签中收集了物候和地理信息,并建立了物候直方图和生态位模型,以研究类群之间的生态差异:本研究证实了目前对Myrcia arenaria、Myrcia neoglabra和Myrcia neoregeliana的描述。相反,四项证据共同支持将 Calyptranthes langsdorffii var.综合分析还支持将Myrcia excoriata与两个类似的、未被描述的类群分开:结论:我们的数据表明,需要对该类群的系统学进行重大改革,确认 12 个物种。由于从博物馆标本中获得了可靠、高质量的数据,我们的研究目标得以成功实现。我们强调了以实物和数字形式保存植物藏品对分类工作的重要性,并提倡利用这些藏品加快热带物种群的整体分类解决方案。鉴于野外工作的资金匮乏以及热带地区前所未有的栖息地丧失速度,这项工作迫在眉睫。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrating datasets from herbarium specimens and images to treat a Neotropical myrtle species complex.

Background and aims: Herbaria are the most important source of information for plant taxonomic work. Resources and technologies available today, such as digitised collections and herbarium DNA sequencing, can help accelerate taxonomic decisions in challenging plant groups. Here we employ an integrative methodology relying exclusively on herbarium specimens to investigate species boundaries in the Neotropical Myrcia neoobscura complex (Myrtaceae).

Methods: We collected morphometric data from high-resolution images of herbarium sheets and analysed it using hierarchical clustering. We posteriorly tested the obtained morpho-groups with phylogenomics using the Angiosperms353 probe kit. We also gathered phenological and geographic information from specimen labels and built phenological histograms and ecological niche models to investigate ecological differences amongst taxa.

Key results: Current circumscriptions of Myrcia arenaria, Myrcia neoglabra and Myrcia neoregeliana are confirmed in this study. Conversely, the four pieces of evidence together support Calyptranthes langsdorffii var. grandiflora, Marlierea regeliana var. parviflora and Marlierea warmingiana as separate from Myrcia marliereana, Myrcia neoriedeliana and Myrcia neoobscura, respectively, contrary to arrangements proposed by previous authors. Integrated analyses also support separation between Myrcia excoriata and two similar, undescribed taxa.

Conclusions: Our data reveal the need for major changes in the systematics of the group, with recognition of 12 species. The successful delivery of our study aims was possible due to obtaining robust, high-quality data from museum specimens. We emphasise the importance of maintaining botanical collections physically and digitally available for taxonomic work and advocate their use to accelerate holistic taxonomic solutions of tropical species complexes. This is urgent, given the paucity of funds for fieldwork and unprecedented rates of habitat loss in the tropics.

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来源期刊
Annals of botany
Annals of botany 生物-植物科学
CiteScore
7.90
自引率
4.80%
发文量
138
审稿时长
3 months
期刊介绍: Annals of Botany is an international plant science journal publishing novel and rigorous research in all areas of plant science. It is published monthly in both electronic and printed forms with at least two extra issues each year that focus on a particular theme in plant biology. The Journal is managed by the Annals of Botany Company, a not-for-profit educational charity established to promote plant science worldwide. The Journal publishes original research papers, invited and submitted review articles, ''Research in Context'' expanding on original work, ''Botanical Briefings'' as short overviews of important topics, and ''Viewpoints'' giving opinions. All papers in each issue are summarized briefly in Content Snapshots , there are topical news items in the Plant Cuttings section and Book Reviews . A rigorous review process ensures that readers are exposed to genuine and novel advances across a wide spectrum of botanical knowledge. All papers aim to advance knowledge and make a difference to our understanding of plant science.
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