针对水生风险的空气污染物计算模型:预测生态毒性,探索结构特征。

Feyza Kelleci Çelik, Gul Karaduman
{"title":"针对水生风险的空气污染物计算模型:预测生态毒性,探索结构特征。","authors":"Feyza Kelleci Çelik, Gul Karaduman","doi":"10.1016/j.chemosphere.2024.143501","DOIUrl":null,"url":null,"abstract":"<p><p>Assessing the aquatic toxicity originating from air pollutants is essential in sustaining water resources and maintaining the ecosystem's safety. Quantitative structure-activity relationship (QSAR) models provide a computational tool for predicting pollutant toxicity, facilitating the identification/evaluation of the contaminants and identifying responsible structural fragments. One-vs-all (OvA) QSAR is a tailored approach to address multi-class QSAR problems. The study aims to determine five distinct levels of aquatic hazard categories for airborne pollutants using OvA-QSAR modeling containing 254 air contaminants. This QSAR analysis reveals the critical descriptors of air pollutants to target for molecular modification. Various factors, including the selection of relevant mechanistic descriptors, data quality, and outliers, determine the reliability of QSAR models. By employing feature selection and outlier identification approaches, the robustness and accuracy of our QSAR models were significantly increased, leading to more reliable predictions in chemical hazard assessment. The results revealed that models using the Random Forest algorithm performed the best based on the selected descriptors, with internal and external validation accuracy ranging from 71.90% to 97.53% and 76.47%-98.03%, respectively. This study indicated that the aquatic risk of air contaminants might be attributed predominantly to their sp3/sp2 carbon ratio, hydrogen-bond acceptor capability, hydrophilicity/lipophilicity, and van der Waals volumes. These structures can be critical in developing innovative strategies to mitigate or avoid the chemicals' harmful effects. Supporting air quality improvement, this study contributes to the rapid implementation of measures to protect aquatic ecosystems affected by air pollution.</p>","PeriodicalId":93933,"journal":{"name":"Chemosphere","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Computational modeling of air pollutants for aquatic risk: Prediction of ecological toxicity and exploring structural characteristics.\",\"authors\":\"Feyza Kelleci Çelik, Gul Karaduman\",\"doi\":\"10.1016/j.chemosphere.2024.143501\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Assessing the aquatic toxicity originating from air pollutants is essential in sustaining water resources and maintaining the ecosystem's safety. Quantitative structure-activity relationship (QSAR) models provide a computational tool for predicting pollutant toxicity, facilitating the identification/evaluation of the contaminants and identifying responsible structural fragments. One-vs-all (OvA) QSAR is a tailored approach to address multi-class QSAR problems. The study aims to determine five distinct levels of aquatic hazard categories for airborne pollutants using OvA-QSAR modeling containing 254 air contaminants. This QSAR analysis reveals the critical descriptors of air pollutants to target for molecular modification. Various factors, including the selection of relevant mechanistic descriptors, data quality, and outliers, determine the reliability of QSAR models. By employing feature selection and outlier identification approaches, the robustness and accuracy of our QSAR models were significantly increased, leading to more reliable predictions in chemical hazard assessment. The results revealed that models using the Random Forest algorithm performed the best based on the selected descriptors, with internal and external validation accuracy ranging from 71.90% to 97.53% and 76.47%-98.03%, respectively. This study indicated that the aquatic risk of air contaminants might be attributed predominantly to their sp3/sp2 carbon ratio, hydrogen-bond acceptor capability, hydrophilicity/lipophilicity, and van der Waals volumes. These structures can be critical in developing innovative strategies to mitigate or avoid the chemicals' harmful effects. Supporting air quality improvement, this study contributes to the rapid implementation of measures to protect aquatic ecosystems affected by air pollution.</p>\",\"PeriodicalId\":93933,\"journal\":{\"name\":\"Chemosphere\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-10-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Chemosphere\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1016/j.chemosphere.2024.143501\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemosphere","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1016/j.chemosphere.2024.143501","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

评估空气污染物对水生生物的毒性对于保护水资源和维护生态系统安全至关重要。定量结构-活性关系(QSAR)模型为预测污染物的毒性提供了一种计算工具,有助于识别/评估污染物并确定负责的结构片段。单对全(OvA)QSAR 是一种解决多类 QSAR 问题的定制方法。本研究旨在利用包含 254 种空气污染物的 OvA-QSAR 模型,确定五种不同级别的空气污染物水生危害类别。该 QSAR 分析揭示了空气污染物的关键描述指标,可作为分子改造的目标。包括相关机理描述因子的选择、数据质量和异常值在内的各种因素决定了 QSAR 模型的可靠性。通过采用特征选择和异常值识别方法,我们的 QSAR 模型的稳健性和准确性得到了显著提高,从而在化学危害评估中做出了更可靠的预测。结果表明,基于所选描述符,使用随机森林算法的模型表现最佳,内部和外部验证准确率分别为 71.90% 至 97.53% 和 76.47% 至 98.03%。这项研究表明,空气污染物的水生风险可能主要归因于其 sp3/sp2 碳比例、氢键接受能力、亲水性/亲油性和范德华体积。这些结构对于制定减轻或避免化学品有害影响的创新战略至关重要。这项研究为改善空气质量提供了支持,有助于快速实施保护受空气污染影响的水生生态系统的措施。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Computational modeling of air pollutants for aquatic risk: Prediction of ecological toxicity and exploring structural characteristics.

Assessing the aquatic toxicity originating from air pollutants is essential in sustaining water resources and maintaining the ecosystem's safety. Quantitative structure-activity relationship (QSAR) models provide a computational tool for predicting pollutant toxicity, facilitating the identification/evaluation of the contaminants and identifying responsible structural fragments. One-vs-all (OvA) QSAR is a tailored approach to address multi-class QSAR problems. The study aims to determine five distinct levels of aquatic hazard categories for airborne pollutants using OvA-QSAR modeling containing 254 air contaminants. This QSAR analysis reveals the critical descriptors of air pollutants to target for molecular modification. Various factors, including the selection of relevant mechanistic descriptors, data quality, and outliers, determine the reliability of QSAR models. By employing feature selection and outlier identification approaches, the robustness and accuracy of our QSAR models were significantly increased, leading to more reliable predictions in chemical hazard assessment. The results revealed that models using the Random Forest algorithm performed the best based on the selected descriptors, with internal and external validation accuracy ranging from 71.90% to 97.53% and 76.47%-98.03%, respectively. This study indicated that the aquatic risk of air contaminants might be attributed predominantly to their sp3/sp2 carbon ratio, hydrogen-bond acceptor capability, hydrophilicity/lipophilicity, and van der Waals volumes. These structures can be critical in developing innovative strategies to mitigate or avoid the chemicals' harmful effects. Supporting air quality improvement, this study contributes to the rapid implementation of measures to protect aquatic ecosystems affected by air pollution.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信