胖大海（Chenopodium album L.）的基因组序列

Q1 Medicine

Wellcome Open Research Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI:10.12688/wellcomeopenres.23015.1

Sahr Mian, Maarten J M Christenhusz

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引用次数: 0

摘要

我们展示了陈皮（Chenopodium album；Streptophyta；Magnoliopsida；Caryophyllales；Chenopodiaceae）个体的基因组序列。该基因组序列总长度为 1,593.80 兆字节。大部分序列组装成 27 个染色体假分子支架，表明该个体为异源六倍体（2 n = 6 x = 56）。线粒体和质粒基因组的组装长度分别为 312.95 千碱基和 152.06 千碱基。在 Ensembl 上对该基因组进行的基因注释发现了 50,077 个编码蛋白质的基因。

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The genome sequence of fat-hen, Chenopodium album L.

We present a genome assembly from an individual Chenopodium album (fat-hen; Streptophyta; Magnoliopsida; Caryophyllales; Chenopodiaceae). The genome sequence has a total length of 1,593.80 megabases. Most of the assembly (99.61%) is scaffolded into 27 chromosomal pseudomolecules suggesting the individual is an allohexaploid (2 n = 6 x = 54). The mitochondrial and plastid genome assemblies have lengths of 312.95 kilobases and 152.06 kilobases, respectively. Gene annotation of this assembly on Ensembl identified 50,077 protein-coding genes.

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来源期刊

Wellcome Open Research Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (all)

CiteScore

5.50

自引率

0.00%

发文量

426

审稿时长

1 weeks

期刊介绍： Wellcome Open Research publishes scholarly articles reporting any basic scientific, translational and clinical research that has been funded (or co-funded) by Wellcome. Each publication must have at least one author who has been, or still is, a recipient of a Wellcome grant. Articles must be original (not duplications). All research, including clinical trials, systematic reviews, software tools, method articles, and many others, is welcome and will be published irrespective of the perceived level of interest or novelty; confirmatory and negative results, as well as null studies are all suitable. See the full list of article types here. All articles are published using a fully transparent, author-driven model: the authors are solely responsible for the content of their article. Invited peer review takes place openly after publication, and the authors play a crucial role in ensuring that the article is peer-reviewed by independent experts in a timely manner. Articles that pass peer review will be indexed in PubMed and elsewhere. Wellcome Open Research is an Open Research platform: all articles are published open access; the publishing and peer-review processes are fully transparent; and authors are asked to include detailed descriptions of methods and to provide full and easy access to source data underlying the results to improve reproducibility.