深海小行星 Leptychaster arcticus(Valvatacea: Paxillosida: Astropectinidae)的首个完整线粒体基因组和系统发育分析。

Pub Date : 2024-09-23 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2404208
Philjae Kim, Chang Rak Jo, Young Sun Song, Jung-Hye Won
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引用次数: 0

摘要

本研究考察了深海栖息小行星北极栉水母(Leptychaster arcticus)的完整线粒体基因组。北极蛙完整的线粒体基因组长度为 16,253 bp,包含 13 个蛋白质编码基因、22 个转运 RNA 基因和 2 个核糖体 RNA 基因。与其他棘尾虫相比,没有观察到基因重排或缺失。ND4L 和 ND3 基因的起始密码子为 "ATT",这在以往的棘皮动物线粒体研究中也曾发现过。在基于 Valvatacea 超目进行的 ML 树分析中,由于缺乏可获得的小行星分子数据,很难在较低的分类级别(如目和科)上建立分子系统发育关系。因此,我们期望在今后的研究中为扩大数据和确定系统发育定位做出贡献。
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The first complete mitochondrial genome and phylogenetic analysis of deep-sea asteroid, Leptychaster arcticus (Valvatacea: Paxillosida: Astropectinidae).

The complete mitochondrial genome of Leptychaster arcticus, deep-sea inhabited asteroid, was examined in this study. The complete mitogenome of L. arcticus is 16,253 bp in length and contains 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. No gene rearrangements or deletions were observed in compared to other Paxillosida. The ND4L and ND3 genes have 'ATT' as its start codon, which is a feature that has been found in previous echinoderm mitochondrial studies. In the ML tree analysis based on the superorder Valvatacea, it was difficult to establish the molecular phylogenetic relationship at lower taxonomic levels, such as order and family, due to the lack of asteroid molecular data available. Therefore, we expect to contribute to the expansion of the data and determine the phylogenetic positioning in future studies.

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