聚焦-邮递区号

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Agneesh Barua
{"title":"聚焦-邮递区号","authors":"Agneesh Barua","doi":"10.1002/jez.b.23277","DOIUrl":null,"url":null,"abstract":"<p></p><p>Agneesh Barua was a recipient of the SMBE Graduate Student Excellence Award by the Society for Molecular Biology and Evolution and the Peter Gruss Doctoral Dissertation Excellence Award by the Okinawa Institute of Science and Technology. He received an honorable mention for the Birnstiel Award of the Research Institute of Molecular Pathology (Austria). Agneesh was also awarded an HFSP Long-Term Fellowship by the Human Frontier Science Program.</p><p>Agnees Barua is the first author of the PNAS paper “An ancient, conserved gene regulatory network led to the rise of oral venom systems” (2021, co-authored with Alexander Mikheyev).</p><p>Personal website: https://agneeshbarua.github.io/agneesh_website</p><p>Google scholar page: https://scholar.google.com/citations?user=1AcPd8kAAAAJ</p><p><b>With whom and where did you study?</b></p><p>I did my PhD at the Okinawa Institute of Science and Technology (OIST) under the supervision of Professor Alexander Mikheyev. The main focus of my PhD was unraveling the evolution genetics of snake venoms.</p><p><b>What got you interested in Biology? When did you know EvoDevo was for you?</b></p><p>For as long as I can remember, I have always been fascinated by animals and their diversity. The way evolutionary processes, acting on species across timescales, interact with developmental processes within an organism throughout its lifetime to produce the vast array of phenotypic diversity is truly captivating. There is a certain elegance and beauty to this aspect of nature that I find deeply inspiring. During my PhD, I honed my quantitative and computational skills, but it was a talk by Professor Vincent Laudet on the evo-devo of clownfish, which I attended near the end of my PhD, that sparked my curiosity, leading to the decision to study teleost fish and focus on evo-devo.</p><p><b>What scientific challenges and opportunities does EvoDevo provide that help you design research projects that go beyond your graduate research?</b></p><p>My graduate research was primarily theoretical, with a substantial bioinformatics component. I analysed genomic data to uncover patterns of molecular evolution and made predictions about the roles genes and biological processes might play in shaping phenotypic traits. While many of my predictions about venom evolution have been confirmed in multiple species of venomous animals, achieving true mechanistic validation has been challenging. This difficulty largely stems from the nature of the questions I posed and the limited means available for testing them at a mechanistic level. However, an evo-devo framework allows me to formulate questions that can lead to testable predictions. For example, do genes that regulate metamorphosis in teleosts also influence trait variation between species?</p><p><b>What is the biggest challenge you face as a postdoc? What issues do feel the discipline needs to address for junior researchers?</b></p><p>As someone aspiring to become a PI, I find the greatest challenge lies in striking the right balance between publishing high-impact research, demonstrating a sufficient degree of independence, and developing novel research directions. In today's academic environment, high-impact papers are often the result of collaborations between multidisciplinary teams, taking several years to complete, and frequently involving multiple co-first authors. On the other hand, studies that showcase independence, often struggle to produce the kind of groundbreaking insights that high-impact journals deem ‘suitable’ for publication. Lastly, pursuing novel research carries inherent risks, with uncertain outcomes.</p><p>In academia, where pretty much everyone is overworked, summary metrics like impact factor and <i>h</i>-index are frequently relied upon to make critical hiring decisions. Although many academics agree that these metrics are imperfect, progress toward more holistic evaluation methods remains slow. I feel it is crucial to give academics more time to engage with their research and to assess applications more comprehensively, with an emphasis on potential contributions to knowledge and reproducibility.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/jez.b.23277","citationCount":"0","resultStr":"{\"title\":\"In the Spotlight—Postdoc\",\"authors\":\"Agneesh Barua\",\"doi\":\"10.1002/jez.b.23277\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p></p><p>Agneesh Barua was a recipient of the SMBE Graduate Student Excellence Award by the Society for Molecular Biology and Evolution and the Peter Gruss Doctoral Dissertation Excellence Award by the Okinawa Institute of Science and Technology. He received an honorable mention for the Birnstiel Award of the Research Institute of Molecular Pathology (Austria). Agneesh was also awarded an HFSP Long-Term Fellowship by the Human Frontier Science Program.</p><p>Agnees Barua is the first author of the PNAS paper “An ancient, conserved gene regulatory network led to the rise of oral venom systems” (2021, co-authored with Alexander Mikheyev).</p><p>Personal website: https://agneeshbarua.github.io/agneesh_website</p><p>Google scholar page: https://scholar.google.com/citations?user=1AcPd8kAAAAJ</p><p><b>With whom and where did you study?</b></p><p>I did my PhD at the Okinawa Institute of Science and Technology (OIST) under the supervision of Professor Alexander Mikheyev. The main focus of my PhD was unraveling the evolution genetics of snake venoms.</p><p><b>What got you interested in Biology? When did you know EvoDevo was for you?</b></p><p>For as long as I can remember, I have always been fascinated by animals and their diversity. The way evolutionary processes, acting on species across timescales, interact with developmental processes within an organism throughout its lifetime to produce the vast array of phenotypic diversity is truly captivating. There is a certain elegance and beauty to this aspect of nature that I find deeply inspiring. During my PhD, I honed my quantitative and computational skills, but it was a talk by Professor Vincent Laudet on the evo-devo of clownfish, which I attended near the end of my PhD, that sparked my curiosity, leading to the decision to study teleost fish and focus on evo-devo.</p><p><b>What scientific challenges and opportunities does EvoDevo provide that help you design research projects that go beyond your graduate research?</b></p><p>My graduate research was primarily theoretical, with a substantial bioinformatics component. I analysed genomic data to uncover patterns of molecular evolution and made predictions about the roles genes and biological processes might play in shaping phenotypic traits. While many of my predictions about venom evolution have been confirmed in multiple species of venomous animals, achieving true mechanistic validation has been challenging. This difficulty largely stems from the nature of the questions I posed and the limited means available for testing them at a mechanistic level. However, an evo-devo framework allows me to formulate questions that can lead to testable predictions. For example, do genes that regulate metamorphosis in teleosts also influence trait variation between species?</p><p><b>What is the biggest challenge you face as a postdoc? What issues do feel the discipline needs to address for junior researchers?</b></p><p>As someone aspiring to become a PI, I find the greatest challenge lies in striking the right balance between publishing high-impact research, demonstrating a sufficient degree of independence, and developing novel research directions. In today's academic environment, high-impact papers are often the result of collaborations between multidisciplinary teams, taking several years to complete, and frequently involving multiple co-first authors. On the other hand, studies that showcase independence, often struggle to produce the kind of groundbreaking insights that high-impact journals deem ‘suitable’ for publication. Lastly, pursuing novel research carries inherent risks, with uncertain outcomes.</p><p>In academia, where pretty much everyone is overworked, summary metrics like impact factor and <i>h</i>-index are frequently relied upon to make critical hiring decisions. Although many academics agree that these metrics are imperfect, progress toward more holistic evaluation methods remains slow. I feel it is crucial to give academics more time to engage with their research and to assess applications more comprehensively, with an emphasis on potential contributions to knowledge and reproducibility.</p>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2024-09-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1002/jez.b.23277\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/jez.b.23277\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/jez.b.23277","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

阿格尼什-巴鲁瓦曾获得分子生物学与进化学会颁发的 SMBE 研究生优秀奖和冲绳科学技术研究所颁发的 Peter Gruss 博士论文优秀奖。他还获得了奥地利分子病理学研究所的 Birnstiel 奖。Agneesh Barua是PNAS论文 "An ancient, conserved gene regulatory network led to the rise of oral venom systems"(2021年,与Alexander Mikheyev合著)的第一作者。个人网站:https://agneeshbarua.github.io/agneesh_websiteGoogle 学术网页:https://scholar.google.com/citations?user=1AcPd8kAAAAJWith 你在哪里学习?我在冲绳科学技术研究所(OIST)攻读博士学位,师从Alexander Mikheyev教授。您为什么对生物学感兴趣?从我记事起,我就一直对动物及其多样性着迷。进化过程跨越时间尺度作用于物种,在生物体的整个生命周期内与发育过程相互作用,产生了大量的表型多样性,这种方式确实令人着迷。大自然的这种优雅和美丽深深地鼓舞着我。在我攻读博士期间,我磨练了自己的定量和计算技能,但在我博士学业即将结束时,我参加了文森特-劳德特(Vincent Laudet)教授关于小丑鱼进化-退化的讲座,这次讲座激发了我的好奇心,让我决定研究长尾鳍鱼并专注于进化-退化。我分析了基因组数据,发现了分子进化的模式,并预测了基因和生物过程在塑造表型特征方面可能发挥的作用。虽然我对毒液进化的许多预测已在多个毒液动物物种中得到证实,但实现真正的机理验证仍具有挑战性。这种困难主要源于我提出的问题的性质,以及在机理层面对这些问题进行检验的手段有限。不过,进化-胚胎发育框架允许我提出可以导致可检验预测的问题。例如,调控远足类动物变态的基因是否也会影响物种间的性状变异?我认为最大的挑战在于如何在发表高影响力的研究成果、展示足够的独立性和开发新的研究方向之间取得适当的平衡。在当今的学术环境中,高影响力的论文往往是多学科团队合作的成果,需要数年时间才能完成,而且经常涉及多个共同第一作者。另一方面,展示独立性的研究往往难以产生被高影响力期刊视为 "适合 "发表的突破性见解。最后,追求新颖的研究具有固有的风险,结果也不确定。在学术界,几乎每个人都工作过度,影响因子和 h 指数等总结性指标经常被用来做出关键的聘用决定。尽管许多学者都认为这些指标并不完美,但朝着更全面的评价方法迈进的步伐依然缓慢。我认为,关键是要给学者们更多的时间参与研究,更全面地评估申请,重点关注对知识的潜在贡献和可复制性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In the Spotlight—Postdoc

Agneesh Barua was a recipient of the SMBE Graduate Student Excellence Award by the Society for Molecular Biology and Evolution and the Peter Gruss Doctoral Dissertation Excellence Award by the Okinawa Institute of Science and Technology. He received an honorable mention for the Birnstiel Award of the Research Institute of Molecular Pathology (Austria). Agneesh was also awarded an HFSP Long-Term Fellowship by the Human Frontier Science Program.

Agnees Barua is the first author of the PNAS paper “An ancient, conserved gene regulatory network led to the rise of oral venom systems” (2021, co-authored with Alexander Mikheyev).

Personal website: https://agneeshbarua.github.io/agneesh_website

Google scholar page: https://scholar.google.com/citations?user=1AcPd8kAAAAJ

With whom and where did you study?

I did my PhD at the Okinawa Institute of Science and Technology (OIST) under the supervision of Professor Alexander Mikheyev. The main focus of my PhD was unraveling the evolution genetics of snake venoms.

What got you interested in Biology? When did you know EvoDevo was for you?

For as long as I can remember, I have always been fascinated by animals and their diversity. The way evolutionary processes, acting on species across timescales, interact with developmental processes within an organism throughout its lifetime to produce the vast array of phenotypic diversity is truly captivating. There is a certain elegance and beauty to this aspect of nature that I find deeply inspiring. During my PhD, I honed my quantitative and computational skills, but it was a talk by Professor Vincent Laudet on the evo-devo of clownfish, which I attended near the end of my PhD, that sparked my curiosity, leading to the decision to study teleost fish and focus on evo-devo.

What scientific challenges and opportunities does EvoDevo provide that help you design research projects that go beyond your graduate research?

My graduate research was primarily theoretical, with a substantial bioinformatics component. I analysed genomic data to uncover patterns of molecular evolution and made predictions about the roles genes and biological processes might play in shaping phenotypic traits. While many of my predictions about venom evolution have been confirmed in multiple species of venomous animals, achieving true mechanistic validation has been challenging. This difficulty largely stems from the nature of the questions I posed and the limited means available for testing them at a mechanistic level. However, an evo-devo framework allows me to formulate questions that can lead to testable predictions. For example, do genes that regulate metamorphosis in teleosts also influence trait variation between species?

What is the biggest challenge you face as a postdoc? What issues do feel the discipline needs to address for junior researchers?

As someone aspiring to become a PI, I find the greatest challenge lies in striking the right balance between publishing high-impact research, demonstrating a sufficient degree of independence, and developing novel research directions. In today's academic environment, high-impact papers are often the result of collaborations between multidisciplinary teams, taking several years to complete, and frequently involving multiple co-first authors. On the other hand, studies that showcase independence, often struggle to produce the kind of groundbreaking insights that high-impact journals deem ‘suitable’ for publication. Lastly, pursuing novel research carries inherent risks, with uncertain outcomes.

In academia, where pretty much everyone is overworked, summary metrics like impact factor and h-index are frequently relied upon to make critical hiring decisions. Although many academics agree that these metrics are imperfect, progress toward more holistic evaluation methods remains slow. I feel it is crucial to give academics more time to engage with their research and to assess applications more comprehensively, with an emphasis on potential contributions to knowledge and reproducibility.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信