Phakopsora pachyrhizi Egh16 类效应器的变异性和功能特征。

IF 1.7 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Genetics and Molecular Biology Pub Date : 2024-09-02 eCollection Date: 2024-01-01 DOI:10.1590/1678-4685-GMB-2023-0192
Fernanda Machado Castanho, Beatriz Lorena Comin da Costa, Valéria Yukari Abe, Alessandra Yokoyama, Luana Mieko Darben, Liliane Santana Oliveira, Everton Geraldo Capote Ferreira, Ivani de Oliveira Negrão Lopes, Mayra Costa da Cruz Gallo de Carvalho, Maria Isabel Balbi-Peña, Francismar Corrêa Marcelino-Guimarães
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引用次数: 0

摘要

亚洲大豆锈病病原 Phakopsora pachyrhizi(Pp)的效应蛋白参与了感染过程。之前的一项研究确定了锈病效应蛋白 Egh16-like 家族在与大豆相互作用过程中的表达谱。在此,我们仔细研究了现有的 Pp 基因组,以验证预测的 Pp Egh16 样家族并鉴定新的家族成员。我们在 Pp MT2006 基因组中描述了 22 个 Egh16 样基因家族成员,在 UFV02 和 K8108 基因组中描述了 18 个成员,突显了家族的扩展。家族成员有一个小信号肽,C端区域有保守的富含半胱氨酸的R/Y/FxC基序,以及一个与毒力相关的Egh16-like结构域,并能抑制Benthamiana中与PTI相关的反应。系统发育分析将该家族成员分为八个簇,其成员在锈病感染的早期阶段被诱导。簇 VI 和簇 VII 的成员以不同的拷贝数存在于 Pp 基因组中,并抑制与 PAMP 相关的反应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Variability and functional characterization of the Phakopsora pachyrhizi Egh16-like effectors.

Effector proteins in Phakopsora pachyrhizi (Pp), the causative agent of Asian Soybean rust, are involved in the infection process. A previous study identified a rust effector Egh16-like family based expression profile during the interaction with soybean. Herein, we scrutinized available the Pp genomes to validate the predicted Egh16-like family of Pp and identify new family members. We described 22 members of the Egh16-like gene family in the Pp MT2006 genome and 18 in the UFV02 and K8108 genomes, highlighting a family expansion. Family members have a small signal peptide, conserved cysteine-rich R/Y/FxC motifs in the C-terminal region, and a virulence-related Egh16-like domain and were able to suppress PTI related responses in Benthamiana. Phylogenetic analysis placed the family members into eight clusters, with members induced during the early stages of rust infection. Members of clusters VI and VII are present in different copy numbers in Pp genomes and suppressed PAMP-related responses.

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来源期刊
Genetics and Molecular Biology
Genetics and Molecular Biology 生物-生化与分子生物学
CiteScore
4.20
自引率
4.80%
发文量
111
审稿时长
3 months
期刊介绍: Genetics and Molecular Biology (formerly named Revista Brasileira de Genética/Brazilian Journal of Genetics - ISSN 0100-8455) is published by the Sociedade Brasileira de Genética (Brazilian Society of Genetics). The Journal considers contributions that present the results of original research in genetics, evolution and related scientific disciplines. Manuscripts presenting methods and applications only, without an analysis of genetic data, will not be considered.
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