染色质组织与细胞核力学的相互作用

IF 3.2 3区 生物学 Q2 BIOPHYSICS
Biophysical journal Pub Date : 2024-10-01 Epub Date: 2024-08-08 DOI:10.1016/j.bpj.2024.08.003
Marco De Corato, Maria Jose Gomez-Benito
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引用次数: 0

摘要

真核细胞的细胞核不断受到各种机械刺激,这会影响染色质的组织,进而影响遗传信息的表达。不同研究小组的实验表明,细胞核变形可导致染色质短暂或永久性的凝集或解凝,并导致基因的机械激活,从而改变蛋白质的转录。染色质组织的变化反过来又会改变细胞核的机械特性,从而可能导致辅助行为。在这里,我们将细胞核的机械特性建模为一种化学活性聚合物凝胶,其中染色质可以存在两种状态:一种是代表异染色质的自吸引状态,另一种是代表常染色质的排斥状态。该模型预测了细胞核发生外部变形时染色质凝聚水平的可逆或不可逆变化。我们发现,在小变形和大变形的情况下,染色质凝集水平在很大的参数范围内都会发生辅助反应。这些结果与实验观察结果一致,突出了染色质组织在细胞核机械响应中的关键作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Interplay of chromatin organization and mechanics of the cell nucleus.

The nucleus of eukaryotic cells is constantly subjected to different kinds of mechanical stimuli, which can impact the organization of chromatin and, subsequently, the expression of genetic information. Experiments from different groups showed that nuclear deformation can lead to transient or permanent condensation or decondensation of chromatin and the mechanical activation of genes, thus altering the transcription of proteins. Changes in chromatin organization, in turn, change the mechanical properties of the nucleus, possibly leading to an auxetic behavior. Here, we model the mechanics of the nucleus as a chemically active polymer gel in which the chromatin can exist in two states: a self-attractive state representing the heterochromatin and a repulsive state representing euchromatin. The model predicts reversible or irreversible changes in chromatin condensation levels upon external deformations of the nucleus. We find an auxetic response for a broad range of parameters under small and large deformations. These results agree with experimental observations and highlight the key role of chromatin organization in the mechanical response of the nucleus.

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来源期刊
Biophysical journal
Biophysical journal 生物-生物物理
CiteScore
6.10
自引率
5.90%
发文量
3090
审稿时长
2 months
期刊介绍: BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.
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