GelBox:开源软件,用于提高凝胶和免疫印迹分析的严谨性和可重复性。

IF 4.1 2区 医学 Q1 CARDIAC & CARDIOVASCULAR SYSTEMS
Utku Gulbulak, Austin G Wellette-Hunsucker, Thomas Kampourakis, Kenneth S Campbell
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引用次数: 0

摘要

GelBox 是一款开源软件,其开发目标是提高凝胶和免疫印迹分析的严谨性、可重复性和透明度。它将图像调整(裁剪、旋转、亮度和对比度)、背景校正和带拟合整合到一个应用程序中。用户还可以将图像中的每条泳道与元数据(如样本类型)关联起来。GelBox 数据文件将原始数据、提供的元数据、图像调整和带级分析整合到一个文件中,提高了可追溯性。GelBox 具有友好的用户界面,使用 MATLAB 开发。该软件、安装说明和教程可从 https://campbell-muscle-lab.github.io/GelBox/ 网站获取。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
GelBox: open-source software to improve rigor and reproducibility when analyzing gels and immunoblots.

GelBox is open-source software that was developed with the goal of enhancing rigor, reproducibility, and transparency when analyzing gels and immunoblots. It combines image adjustments (cropping, rotation, brightness, and contrast), background correction, and band-fitting in a single application. Users can also associate each lane in an image with metadata (for example, sample type). GelBox data files integrate the raw data, supplied metadata, image adjustments, and band-level analyses in a single file to improve traceability. GelBox has a user-friendly interface and was developed using MATLAB. The software, installation instructions, and tutorials, are available at https://campbell-muscle-lab.github.io/GelBox/.NEW & NOTEWORTHY GelBox is open-source software that was developed to enhance rigor, reproducibility, and transparency when analyzing gels and immunoblots. It combines image adjustments (cropping, rotation, brightness, and contrast), background correction, and band-fitting in a single application. Users can also associate each lane in an image with metadata (for example, sample type).

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来源期刊
CiteScore
9.60
自引率
10.40%
发文量
202
审稿时长
2-4 weeks
期刊介绍: The American Journal of Physiology-Heart and Circulatory Physiology publishes original investigations, reviews and perspectives on the physiology of the heart, vasculature, and lymphatics. These articles include experimental and theoretical studies of cardiovascular function at all levels of organization ranging from the intact and integrative animal and organ function to the cellular, subcellular, and molecular levels. The journal embraces new descriptions of these functions and their control systems, as well as their basis in biochemistry, biophysics, genetics, and cell biology. Preference is given to research that provides significant new mechanistic physiological insights that determine the performance of the normal and abnormal heart and circulation.
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