印度古吉拉特不同地区 Gmelina arborea Roxb.在印度古吉拉特不同地区的遗传多样性评估:首次报告

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Almutazbellah K. Naji, Pooja G. Trivedi, Kush V. Prajapati, Maulika B. Panchal, Gaurang M. Sindhav
{"title":"印度古吉拉特不同地区 Gmelina arborea Roxb.在印度古吉拉特不同地区的遗传多样性评估:首次报告","authors":"Almutazbellah K. Naji, Pooja G. Trivedi, Kush V. Prajapati, Maulika B. Panchal, Gaurang M. Sindhav","doi":"10.1007/s11105-024-01470-5","DOIUrl":null,"url":null,"abstract":"<p><i>Gmelina arborea (G. arborea)</i>, a plant of great medicinal as well as socioeconomic importance renowned for its traditional utilization, lacks prior genetic diversity studies specifically in Gujarat, India. Therefore, the present study aimed to delve into the genetic variations within <i>G. arborea</i> across six distinct regions (Kutch, Sabarkantha, Ahmedabad, Rajkot, Panchmahal, and Valsad) in Gujarat. This investigation employed Geographical Information System (GIS) for spatial data evaluation, as well as DNA barcoding technique to corroborate the plant’s authenticity. Leveraging 15 different Inter Simple Sequence Repeats (ISSR) markers facilitated the evaluation of genetic diversity present amongst selected regions. Based on Jaccard’s dissimilarity co-efficient, a cluster analysis has been rendered by applying the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) and Unweighted Neighbour Joining (UNJ) methods. The present study portrayed a significant level of polymorphism of 88% among <i>G. arborea</i> from different regions. The assessment of Polymorphic Information Content (PIC) resulted in a value of 0.42, indicating the presence of compelling genetic variation within these regions. The dendrogram illustrated the genetic relatedness and diversity, with a cophenetic correlation coefficient of 0.9818 (UPGMA) and 0.9962 (UNJ). The accession from the Ahmedabad region stands out as the most diverse, whereas the plant from Panchmahal represents the most primitive genome of all. Notably, this research marks the inaugural and comprehensive genetic assessment of <i>G. arborea</i> from Gujarat, India. These findings provide a valuable foundation for further research and conservation strategies for <i>G. arborea</i> and other medicinal plants.</p><h3 data-test=\"abstract-sub-heading\">Graphical Abstract</h3>\n","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-06-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Evaluation of Genetic Diversity in Gmelina arborea Roxb. Across Different Regions of Gujarat, India: The First Report\",\"authors\":\"Almutazbellah K. Naji, Pooja G. Trivedi, Kush V. Prajapati, Maulika B. Panchal, Gaurang M. Sindhav\",\"doi\":\"10.1007/s11105-024-01470-5\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><i>Gmelina arborea (G. arborea)</i>, a plant of great medicinal as well as socioeconomic importance renowned for its traditional utilization, lacks prior genetic diversity studies specifically in Gujarat, India. Therefore, the present study aimed to delve into the genetic variations within <i>G. arborea</i> across six distinct regions (Kutch, Sabarkantha, Ahmedabad, Rajkot, Panchmahal, and Valsad) in Gujarat. This investigation employed Geographical Information System (GIS) for spatial data evaluation, as well as DNA barcoding technique to corroborate the plant’s authenticity. Leveraging 15 different Inter Simple Sequence Repeats (ISSR) markers facilitated the evaluation of genetic diversity present amongst selected regions. Based on Jaccard’s dissimilarity co-efficient, a cluster analysis has been rendered by applying the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) and Unweighted Neighbour Joining (UNJ) methods. The present study portrayed a significant level of polymorphism of 88% among <i>G. arborea</i> from different regions. The assessment of Polymorphic Information Content (PIC) resulted in a value of 0.42, indicating the presence of compelling genetic variation within these regions. The dendrogram illustrated the genetic relatedness and diversity, with a cophenetic correlation coefficient of 0.9818 (UPGMA) and 0.9962 (UNJ). The accession from the Ahmedabad region stands out as the most diverse, whereas the plant from Panchmahal represents the most primitive genome of all. Notably, this research marks the inaugural and comprehensive genetic assessment of <i>G. arborea</i> from Gujarat, India. These findings provide a valuable foundation for further research and conservation strategies for <i>G. arborea</i> and other medicinal plants.</p><h3 data-test=\\\"abstract-sub-heading\\\">Graphical Abstract</h3>\\n\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2024-06-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s11105-024-01470-5\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s11105-024-01470-5","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

乔木(Gmelina arborea,G. arborea)是一种具有重要药用价值和社会经济价值的植物,因其传统用途而闻名于世,但在印度古吉拉特邦却缺乏专门的遗传多样性研究。因此,本研究旨在深入研究古吉拉特邦六个不同地区(Kutch、Sabarkantha、Ahmedabad、Rajkot、Panchmahal 和 Valsad)G. arborea 的遗传变异。这项调查采用地理信息系统(GIS)进行空间数据评估,并采用 DNA 条形码技术来证实植物的真实性。利用 15 种不同的简单序列间重复(ISSR)标记对选定地区的遗传多样性进行了评估。根据 Jaccard 的不相似系数,应用算术平均非加权成对分组法(UPGMA)和非加权邻接法(UNJ)进行了聚类分析。本研究表明,来自不同地区的 arborea 树种的多态性水平高达 88%。多态信息含量(PIC)的评估结果为 0.42,表明这些区域内存在引人注目的遗传变异。树枝图显示了遗传亲缘关系和多样性,共轭相关系数分别为 0.9818(UPGMA)和 0.9962(UNJ)。来自艾哈迈达巴德地区的植株是最多样化的,而来自 Panchmahal 的植株则代表了最原始的基因组。值得注意的是,这项研究标志着对印度古吉拉特邦 G. arborea 的首次全面遗传评估。这些发现为 Arborea 和其他药用植物的进一步研究和保护策略奠定了宝贵的基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Evaluation of Genetic Diversity in Gmelina arborea Roxb. Across Different Regions of Gujarat, India: The First Report

Evaluation of Genetic Diversity in Gmelina arborea Roxb. Across Different Regions of Gujarat, India: The First Report

Gmelina arborea (G. arborea), a plant of great medicinal as well as socioeconomic importance renowned for its traditional utilization, lacks prior genetic diversity studies specifically in Gujarat, India. Therefore, the present study aimed to delve into the genetic variations within G. arborea across six distinct regions (Kutch, Sabarkantha, Ahmedabad, Rajkot, Panchmahal, and Valsad) in Gujarat. This investigation employed Geographical Information System (GIS) for spatial data evaluation, as well as DNA barcoding technique to corroborate the plant’s authenticity. Leveraging 15 different Inter Simple Sequence Repeats (ISSR) markers facilitated the evaluation of genetic diversity present amongst selected regions. Based on Jaccard’s dissimilarity co-efficient, a cluster analysis has been rendered by applying the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) and Unweighted Neighbour Joining (UNJ) methods. The present study portrayed a significant level of polymorphism of 88% among G. arborea from different regions. The assessment of Polymorphic Information Content (PIC) resulted in a value of 0.42, indicating the presence of compelling genetic variation within these regions. The dendrogram illustrated the genetic relatedness and diversity, with a cophenetic correlation coefficient of 0.9818 (UPGMA) and 0.9962 (UNJ). The accession from the Ahmedabad region stands out as the most diverse, whereas the plant from Panchmahal represents the most primitive genome of all. Notably, this research marks the inaugural and comprehensive genetic assessment of G. arborea from Gujarat, India. These findings provide a valuable foundation for further research and conservation strategies for G. arborea and other medicinal plants.

Graphical Abstract

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信