基于环境 DNA 的南海蜈支洲岛鱼类物种多样性

IF 1 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION
Chongzhao Wang, Zhenhua Ma, Kun Cao, Xin Wang, Rui Xi, Ting Jiang, Rui Yang, Yingchun Xing
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引用次数: 0

摘要

蜈支洲岛(WZZ)位于海南岛三亚市北部海棠湾。蜈支洲岛周围海域是典型的热带海洋生态系统,栖息地多样而复杂。因此,WZZ 海洋鱼类种类丰富。WZZ 的海洋生态系统最初在 20 世纪 70-80 年代遭到严重破坏,在 20 世纪 90 年代得到恢复,并于 2019 年建设成为中国首个国家热带海洋牧场示范区。鱼类是海洋生态系统中重要的高营养脊椎动物,了解鱼类物种的组成和分布有助于认识WZZ生态系统的现状,为国家级海洋牧场示范区的建设提供科学数据。本研究利用 eDNA 技术调查了 WZZ 附近的鱼类群落组成,为实现和保护南海海洋生态系统提供了科学依据。WZZ 是中国南海的一个近海岛屿,蕴藏着丰富的海洋鱼类资源。虽然以往的研究对 WZZ 的鱼类物种进行了调查,但由于采样方法和调查季节的限制,数据仍不完整。本研究旨在利用 eDNA 的优势,尽可能补充 WZZ 鱼类物种数据。基于 eDNA,本研究提供了隶属于 17 目 63 科 124 属的 188 种鱼类(包括 9 个未确定种,以属表示)的数据,是 WZZ 附近较为全面的鱼类物种记录。此外,还提供了用于类群鉴定的分子操作分类单元(MOTUs)信息,旨在为建立南海鱼类的特定 eDNA 类群数据库做出贡献。这项研究包括两个数据集,即 WZZ 的鱼类分类群出现情况以及 MOTUs 序列和采样点的地理坐标信息。鱼类分类群出现率 "数据集提供了利用 eDNA 检测到的 188 种鱼类的分类、分布和栖息地情况记录,以及采样点的经纬度信息。"MOTUs 信息 "数据集提供了 188 种鱼类的 MOTUs 序列、序列来源、序列丰度,还包括 NCBI 中匹配的物种和最佳 NCBI BLAST 序列相似度。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Species diversity of fish at the Wuzhizhou Island, South China Sea, based on environmental DNA
Wuzhizhou Island (WZZ) is located in Haitang Bay in the northern region of Sanya, Hainan Island. The sea area surrounding WZZ represents a typical tropical marine ecosystem, characterised by diverse and complex habitats. Therefore, there is a rich variety of marine fish species at WZZ. The marine ecosystem of WZZ was seriously destroyed initially in the 1970s-1980s and recovered in the 1990s, then constructed as the first national tropical marine ranch demonstration area of China in 2019. As fish is an important high trophic vertebrate in the marine ecosystem, understanding the composition and distribution of fish species could help us to recognise the status of the ecosystem of WZZ and supply scientific data for construction of the national marine ranch demonstration area. This study used eDNA technology to investigate the composition of fish community surrounding WZZ and provided a scientific basis for realising and protecting the marine ecosystem of the South China Sea. The WZZ is an offshore island in the South China Sea, harbouring abundant marine fish resources. Although previous research investigated fish species of WZZ, the data were, however, still incomplete due to limitation of sampling methods and survey seasons. In this study, we intended to take advantage of eDNA and supplement data of fish species at WZZ as much as possible. Based on eDNA, this study provided the data on 188 fish species (including nine undetermined species denoted by genus sp.) belonging to 17 orders, 63 families and 124 genera and they were the more comprehensive records of fish species surrounding WZZ. In addition, the information on Molecular Operational Taxonomic Units (MOTUs) for taxon identification was also provided, aiming to contribute to the establishment of a specific eDNA taxon database for fish of the South China Sea. This study included two datasets, which were occurrences of fish taxa at WZZ, as well as MOTUs sequences and geographical coordinate information of sampling sites. The “fish taxon occurrences” dataset presented records on taxonomic, distribution and habitat conditions of 188 fish species detected using eDNA, as well as the latitude and longitude information of the sampling sites, the "MOTUs information" dataset provided the MOTUs sequences, source of sequences, abundance of sequences for 188 fish species, also included the species matched in NCBI and the best NCBI BLAST sequence similarity.
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来源期刊
Biodiversity Data Journal
Biodiversity Data Journal Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
2.20
自引率
7.70%
发文量
283
审稿时长
6 weeks
期刊介绍: Biodiversity Data Journal (BDJ) is a community peer-reviewed, open-access, comprehensive online platform, designed to accelerate publishing, dissemination and sharing of biodiversity-related data of any kind. All structural elements of the articles – text, morphological descriptions, occurrences, data tables, etc. – will be treated and stored as DATA, in accordance with the Data Publishing Policies and Guidelines of Pensoft Publishers. The journal will publish papers in biodiversity science containing taxonomic, floristic/faunistic, morphological, genomic, phylogenetic, ecological or environmental data on any taxon of any geological age from any part of the world with no lower or upper limit to manuscript size.
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