{"title":"HAUS6作为舌鳞状细胞癌关键预后基因的生物信息学分析与验证","authors":"Zhuoyue Yao , Jing Chen , Yue Wang , Liyu Cao","doi":"10.1016/j.archoralbio.2024.106000","DOIUrl":null,"url":null,"abstract":"<div><h3>Objective</h3><p>To explore the expression of HAUS6 in squamous cell carcinoma of the tongue (TSCC) and its relationship with the clinicopathological features of patients, and to further provide new ideas and therapeutic targets for curing TSCC.</p></div><div><h3>Design</h3><p>The Cancer Genome Atlas (TCGA) database was used to screen for differentially expressed genes (DEGs) between TSCC and normal tissues and survival analysis. DEGs of <em>HAUS6</em> were screened and analyzed for GO, KEGG and GSEA enrichment. Exploring the correlation of <em>HAUS6</em> with immune cell infiltration and immune checkpoint-related genes. The expression of HAUS6 in tumor and paraneoplastic tissues was confirmed by immunohistochemistry and Western Blot.</p></div><div><h3>Results</h3><p>Analysis of the TCGA database results showed that expression of <em>HAUS6</em> mRNA was significantly enhanced and correlated with overall survival (OS, <em>p</em> < 0.05) in TSCC. <em>HAUS6</em> expression correlated with the level of immune cell infiltration and immune checkpoint-related genes. Immunohistochemistry and Western Blot confirmed that the expression level of HAUS6 protein was significantly higher in tumor tissues than in paraneoplastic tissues, and that tumor size and hypo-differentiation were higher in the HAUS6 high expression group than in the low expression group in TSCC (<em>p</em> < 0.05).</p></div><div><h3>Conclusions</h3><p>In conclusion, these analyses suggest that HAUS6 can act as an independent predictor of prognosis (<em>p</em> < 0.05) and high HAUS6 expression is strongly associated with poor prognosis.</p></div>","PeriodicalId":8288,"journal":{"name":"Archives of oral biology","volume":"164 ","pages":"Article 106000"},"PeriodicalIF":2.2000,"publicationDate":"2024-05-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0003996924001213/pdfft?md5=dbb2a1ae1a60324f8f55737cea0f04db&pid=1-s2.0-S0003996924001213-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Bioinformatics analysis and validation of HAUS6 as a key prognostic gene in squamous cell carcinoma of the tongue\",\"authors\":\"Zhuoyue Yao , Jing Chen , Yue Wang , Liyu Cao\",\"doi\":\"10.1016/j.archoralbio.2024.106000\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objective</h3><p>To explore the expression of HAUS6 in squamous cell carcinoma of the tongue (TSCC) and its relationship with the clinicopathological features of patients, and to further provide new ideas and therapeutic targets for curing TSCC.</p></div><div><h3>Design</h3><p>The Cancer Genome Atlas (TCGA) database was used to screen for differentially expressed genes (DEGs) between TSCC and normal tissues and survival analysis. DEGs of <em>HAUS6</em> were screened and analyzed for GO, KEGG and GSEA enrichment. Exploring the correlation of <em>HAUS6</em> with immune cell infiltration and immune checkpoint-related genes. The expression of HAUS6 in tumor and paraneoplastic tissues was confirmed by immunohistochemistry and Western Blot.</p></div><div><h3>Results</h3><p>Analysis of the TCGA database results showed that expression of <em>HAUS6</em> mRNA was significantly enhanced and correlated with overall survival (OS, <em>p</em> < 0.05) in TSCC. <em>HAUS6</em> expression correlated with the level of immune cell infiltration and immune checkpoint-related genes. Immunohistochemistry and Western Blot confirmed that the expression level of HAUS6 protein was significantly higher in tumor tissues than in paraneoplastic tissues, and that tumor size and hypo-differentiation were higher in the HAUS6 high expression group than in the low expression group in TSCC (<em>p</em> < 0.05).</p></div><div><h3>Conclusions</h3><p>In conclusion, these analyses suggest that HAUS6 can act as an independent predictor of prognosis (<em>p</em> < 0.05) and high HAUS6 expression is strongly associated with poor prognosis.</p></div>\",\"PeriodicalId\":8288,\"journal\":{\"name\":\"Archives of oral biology\",\"volume\":\"164 \",\"pages\":\"Article 106000\"},\"PeriodicalIF\":2.2000,\"publicationDate\":\"2024-05-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0003996924001213/pdfft?md5=dbb2a1ae1a60324f8f55737cea0f04db&pid=1-s2.0-S0003996924001213-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Archives of oral biology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0003996924001213\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"DENTISTRY, ORAL SURGERY & MEDICINE\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Archives of oral biology","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0003996924001213","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"DENTISTRY, ORAL SURGERY & MEDICINE","Score":null,"Total":0}
引用次数: 0
摘要
目的探讨HAUS6在舌鳞状细胞癌(TSCC)中的表达及其与患者临床病理特征的关系,并进一步为治疗TSCC提供新的思路和治疗靶点。设计利用癌症基因组图谱(TCGA)数据库筛选TSCC与正常组织之间的差异表达基因(DEGs)并进行生存分析。对HAUS6的DEGs进行了GO、KEGG和GSEA富集筛选和分析。探讨HAUS6与免疫细胞浸润和免疫检查点相关基因的相关性。结果TCGA数据库的分析结果显示,HAUS6 mRNA的表达显著增强,并与TSCC的总生存率(OS,p <0.05)相关。HAUS6 的表达与免疫细胞浸润水平和免疫检查点相关基因相关。免疫组化和 Western Blot 证实,HAUS6 蛋白在肿瘤组织中的表达水平明显高于癌旁组织,HAUS6 高表达组的肿瘤大小和低分化程度高于 TSCC 低表达组(p < 0.05)。
Bioinformatics analysis and validation of HAUS6 as a key prognostic gene in squamous cell carcinoma of the tongue
Objective
To explore the expression of HAUS6 in squamous cell carcinoma of the tongue (TSCC) and its relationship with the clinicopathological features of patients, and to further provide new ideas and therapeutic targets for curing TSCC.
Design
The Cancer Genome Atlas (TCGA) database was used to screen for differentially expressed genes (DEGs) between TSCC and normal tissues and survival analysis. DEGs of HAUS6 were screened and analyzed for GO, KEGG and GSEA enrichment. Exploring the correlation of HAUS6 with immune cell infiltration and immune checkpoint-related genes. The expression of HAUS6 in tumor and paraneoplastic tissues was confirmed by immunohistochemistry and Western Blot.
Results
Analysis of the TCGA database results showed that expression of HAUS6 mRNA was significantly enhanced and correlated with overall survival (OS, p < 0.05) in TSCC. HAUS6 expression correlated with the level of immune cell infiltration and immune checkpoint-related genes. Immunohistochemistry and Western Blot confirmed that the expression level of HAUS6 protein was significantly higher in tumor tissues than in paraneoplastic tissues, and that tumor size and hypo-differentiation were higher in the HAUS6 high expression group than in the low expression group in TSCC (p < 0.05).
Conclusions
In conclusion, these analyses suggest that HAUS6 can act as an independent predictor of prognosis (p < 0.05) and high HAUS6 expression is strongly associated with poor prognosis.
期刊介绍:
Archives of Oral Biology is an international journal which aims to publish papers of the highest scientific quality in the oral and craniofacial sciences. The journal is particularly interested in research which advances knowledge in the mechanisms of craniofacial development and disease, including:
Cell and molecular biology
Molecular genetics
Immunology
Pathogenesis
Cellular microbiology
Embryology
Syndromology
Forensic dentistry